| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17230068
Identifier: 17230068
GI number: 17230068
Start: 3078906
End: 3079817
Strand: Direct
Name: 17230068
Synonym: alr2576
Alternate gene names: NA
Gene position: 3078906-3079817 (Clockwise)
Preceding gene: 17230067
Following gene: 17230069
Centisome position: 48.0
GC content: 41.56
Gene sequence:
>912_bases ATGAAGTTTTTCTTCCCCCAAACAGCCCCACTAATTAACTGGGAACGTCCCTATGAATTTCTCGACAAGGAATTTCAACA AATAGCCAGGGAAGCGGAACAGGGTAGAAGATACGCCGATAAATTAGTCAAAGTTTGGCAACTTCAAGGAGAGGAAGTTT GGTTATTGATTCATGTAGAAATCCAAGCCAAACCAGAAGATGACTTTGCCGAAAGGATGTTTTCTTATAACCTGCGAATC TTTGACAAATTTGGTCAACCCGCCATCAGTCTAGCAATTTTGTGTGATGCTGACTCAACTTGGCGACCAAATCAATACAG TTACAATTATCCTGACTGTAGTTTGGACTTTCGATTTGGTAGTGTCAAGCTACTCGATTATCAAAATCGATGGGCAGAAT TAGAAGCTAGCGATAATCCTTTTGCTACGGTGTTAATGGCACATTTAAAGACACAGCAAACCACTAAGCAACCAGGAGAA CGCAAAGCATGGAAATTTAGCTTAATTCGGCGACTGTACGCACAAGGACTACAAGAAAGGGATATTCGTAACCTTTATCG TTTTATTGATTGGGTTATGATTTTACCAAAAGCGTTAGAAGCAGAATTTTGGCAAGAGTTTAAACAATTTGAGCAGGAGC GTACCATGAGTTACATTACCACAGGTGAGCGCATTGGCTACGAGCGTGGCAAAGAAGAAGGGCAACTAAAACAAGCGCAA GCACTTGTACTACGGTTACTGCAAAAACGGGTGGGAGATTTACCCGCAGAAGTTCGGGAACAGATTCAAAGTCTTTCTCT AGAACAGTTGGCAACACTGGGTGAGGCTTTATTAGATTTTAGTGCGATCTCTGACTTATTCAACTGGCTAGACGCAAATC ACGCTAATGATAATCATGGTGTACAAGCTTGA
Upstream 100 bases:
>100_bases TAAACACAAATCTAGCAGTTAACCCATGAGCGAGGAAAGAGAAAGAGCCGATAATGATTCACCGTGGAAATAAATTTTAG AAGCCTACTTTCCCCAAGCA
Downstream 100 bases:
>100_bases AGATAAAGGATTTAGTAGGCGATCGCTAACACTAAGCTTCCCTCTAACGCATATTTGCTGCTAAAATCCTCCAAAGGTTT AGGCAGACTTTTCATGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MKFFFPQTAPLINWERPYEFLDKEFQQIAREAEQGRRYADKLVKVWQLQGEEVWLLIHVEIQAKPEDDFAERMFSYNLRI FDKFGQPAISLAILCDADSTWRPNQYSYNYPDCSLDFRFGSVKLLDYQNRWAELEASDNPFATVLMAHLKTQQTTKQPGE RKAWKFSLIRRLYAQGLQERDIRNLYRFIDWVMILPKALEAEFWQEFKQFEQERTMSYITTGERIGYERGKEEGQLKQAQ ALVLRLLQKRVGDLPAEVREQIQSLSLEQLATLGEALLDFSAISDLFNWLDANHANDNHGVQA
Sequences:
>Translated_303_residues MKFFFPQTAPLINWERPYEFLDKEFQQIAREAEQGRRYADKLVKVWQLQGEEVWLLIHVEIQAKPEDDFAERMFSYNLRI FDKFGQPAISLAILCDADSTWRPNQYSYNYPDCSLDFRFGSVKLLDYQNRWAELEASDNPFATVLMAHLKTQQTTKQPGE RKAWKFSLIRRLYAQGLQERDIRNLYRFIDWVMILPKALEAEFWQEFKQFEQERTMSYITTGERIGYERGKEEGQLKQAQ ALVLRLLQKRVGDLPAEVREQIQSLSLEQLATLGEALLDFSAISDLFNWLDANHANDNHGVQA >Mature_303_residues MKFFFPQTAPLINWERPYEFLDKEFQQIAREAEQGRRYADKLVKVWQLQGEEVWLLIHVEIQAKPEDDFAERMFSYNLRI FDKFGQPAISLAILCDADSTWRPNQYSYNYPDCSLDFRFGSVKLLDYQNRWAELEASDNPFATVLMAHLKTQQTTKQPGE RKAWKFSLIRRLYAQGLQERDIRNLYRFIDWVMILPKALEAEFWQEFKQFEQERTMSYITTGERIGYERGKEEGQLKQAQ ALVLRLLQKRVGDLPAEVREQIQSLSLEQLATLGEALLDFSAISDLFNWLDANHANDNHGVQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35721; Mature: 35721
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFFFPQTAPLINWERPYEFLDKEFQQIAREAEQGRRYADKLVKVWQLQGEEVWLLIHVE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE IQAKPEDDFAERMFSYNLRIFDKFGQPAISLAILCDADSTWRPNQYSYNYPDCSLDFRFG EECCCCHHHHHHHHHCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEC SVKLLDYQNRWAELEASDNPFATVLMAHLKTQQTTKQPGERKAWKFSLIRRLYAQGLQER CEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH DIRNLYRFIDWVMILPKALEAEFWQEFKQFEQERTMSYITTGERIGYERGKEEGQLKQAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHCCCCCHHHHHHH ALVLRLLQKRVGDLPAEVREQIQSLSLEQLATLGEALLDFSAISDLFNWLDANHANDNHG HHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VQA CCC >Mature Secondary Structure MKFFFPQTAPLINWERPYEFLDKEFQQIAREAEQGRRYADKLVKVWQLQGEEVWLLIHVE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE IQAKPEDDFAERMFSYNLRIFDKFGQPAISLAILCDADSTWRPNQYSYNYPDCSLDFRFG EECCCCHHHHHHHHHCCHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEC SVKLLDYQNRWAELEASDNPFATVLMAHLKTQQTTKQPGERKAWKFSLIRRLYAQGLQER CEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH DIRNLYRFIDWVMILPKALEAEFWQEFKQFEQERTMSYITTGERIGYERGKEEGQLKQAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHCCCCCHHHHHHH ALVLRLLQKRVGDLPAEVREQIQSLSLEQLATLGEALLDFSAISDLFNWLDANHANDNHG HHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VQA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA