| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is kinE [H]
Identifier: 17229973
GI number: 17229973
Start: 2979503
End: 2981620
Strand: Direct
Name: kinE [H]
Synonym: alr2481
Alternate gene names: 17229973
Gene position: 2979503-2981620 (Clockwise)
Preceding gene: 17229971
Following gene: 17229974
Centisome position: 46.45
GC content: 41.31
Gene sequence:
>2118_bases ATGTATAATGAAACACTGAAGCAGCAAATAAATCTACTCCAGCAACAAAACGCTCAATTAAAGCAACAGTTGGCTGCAAC TACCCAAGAATCTAGTGCAGTTATCGCCCGACTGGAACAGGAACTCAGTGAATCTAAAAACTTGTTGCTATTTTTTGATA TTTCAGTGGATATACTCTGTATTGCTGACTTTAATGGCCATTTTCAGCGAGTGAATCAGGCTGGTGAAGATATTTTGGGT TATTCTCAAGCGGAGCTTTTATCTTTACCCTTCATGGAGCTAGTACATCCAGAAGATAGAGCCGCTACCTTGGCTGAAAT GTCTAAGTTAAGTGAAGGAATTCGGGTTTTTCGGTTGGAAAATCGCTATCGCTGCAAAGATGGTTCCTATCGCTGGCTAT CGTGGACTTTGGTTGGTCACGATAACTATATTTTGGCGATGGCTAGAGATGTGAGCGATAGTGTTGAGCTTCGCTCATGC AAACAAACTGAAGTCACGCTACGTCAACAAGAAGCCCAGTATCGGGGCATTTTTGAGACTGTGAATGATGGTATCGGCGT TATAGATTTGGATACTAGCAAGTTAGTTGCGGTGAATCCTGCTTTTTGTGAGATGCACGGCTATTCTCAATCTGAGTTTC TCAATCTCAACCCCACAGATTATATTCACGCCGAATCTTATGAGAAGTTTGGGGATTTTATCAAAACAGTGAAAGCTGGG CAGAAATATCATACCCAAGCTGTAGGTATTTGCAAAGACGGTACTAGCTTTGATATAGAAGTCACAGGAAAACTGCTTTA CTACGATGGTAAGCCTCATGCCATTGCGGTAGTGAGGGATATTAGTGAGCGCGTAGAAGCAGAACGGGAACAAAAAAGAT TACTGGCAATTTTGGAAGCAACCCCTGATATTGTTGGTATAGCTGATGCGTCTGGAATAAATTGCTACTTAAATCAAGCG GCACAGAATTTGCTGGGTATCCCCACAACTGAGAAATTTCCTATCGCTTCGGCGACGGGAGTGTCAATGTTAGAGAGATT TCAGACTGAAATTATACCTACAGTTATGGAACAGGGAATTTGGTCTGGAGAATCTTTAATGCGATCGCGCAACGGAGAAG AGTTCCCTGTTTCTCAAGTGATTATTGCCCATAAAAATGAACAAGGGGAAGTAGAATTTTTATCCACTATTGCCCGTGAT ATCCGCGATCGCCAACAAATTGAAGCCCGACTCAGACAACAAGCGCAAGATTTAGAAACAACTGTGCAAGAACTCCAACG CACTCAGACGCAGATGATTCAAGCAGAGAAAATGTCTAGCTTAGGACAGTTGGTTGCTGGTGTCGCCCACGAAATTAATA ATCCTGTTAACTTTATCCACGGTAATCTCAATTATCTTGAGGAGCATACTCAAGACTTACTGCGAATTATTGAAGTTTAT CAACAAAAAAATCCCAATTATGAACCTGGATTACAAGATTTGCATGAGGAAATTGACCTGGAATATATCCAACAAGATTT GCCAAAAATTTTAAACTCTATGAAGGTGGGTACTCAACGTATCCGCCAAATTGTGTTGTCGTTGCGTACTTTTTCTCGCA TGGATGAAGCTGAATTTAAAGCTGTGGACATTCATGCAGGCATCGATAGTACTTTAATGATCTTACAACATCGCCTCAAA GAGCAACCAGAACGTCCAGCCGTTCAAGTGATTAAGGACTATGGGACTTTACCATCAGTAGAATGCTATGCGGGGCAGCT TAATCAAGTTTTTATGAATATTCTAGCAAACGCCATTGATGCTTTAGAGGACGGAATAGTTAAAGGAGAATGGGTAATGG GTAATGGGGAAATTCCCACAATTCGGATTTCTACTTCAGTTAGCGGTGCTAATTGGATTAGGATGGCGATCGCTGATAAC GGTATGGGTATGTCAGAAAAAACTCAACAACAGATATTTAATCCGTTTTTTACTACCAAGCCTGTGGGCAAAGGAACAGG TATGGGGATGTCTATCAGTTACCAAATCATCACCGAAAAGCATGGCGGTAAACTGCAATGTAATTCCCACCCTGGGAAAG GTACAGAATTTATCATTGAAATTCCTATTCAACAATAA
Upstream 100 bases:
>100_bases TAAGTAACAGGAAAAGATGTATTTTCAATTGCCAATTAACCAGTCTTAAAAGCACATCTACATAACTCCAGATTAAACCT GACGACTTATTAAATAGCTT
Downstream 100 bases:
>100_bases ATAATACCAATTTTAAAAAAGAATGCGACAGATATACAGCCCCAAATGCTTGTCCTGTATTGATTATTAATTTTTAATTT TTAATTGGTATAACTTTTGA
Product: two-component sensor histidine kinase
Products: NA
Alternate protein names: Sensor histidine kinase E [H]
Number of amino acids: Translated: 705; Mature: 705
Protein sequence:
>705_residues MYNETLKQQINLLQQQNAQLKQQLAATTQESSAVIARLEQELSESKNLLLFFDISVDILCIADFNGHFQRVNQAGEDILG YSQAELLSLPFMELVHPEDRAATLAEMSKLSEGIRVFRLENRYRCKDGSYRWLSWTLVGHDNYILAMARDVSDSVELRSC KQTEVTLRQQEAQYRGIFETVNDGIGVIDLDTSKLVAVNPAFCEMHGYSQSEFLNLNPTDYIHAESYEKFGDFIKTVKAG QKYHTQAVGICKDGTSFDIEVTGKLLYYDGKPHAIAVVRDISERVEAEREQKRLLAILEATPDIVGIADASGINCYLNQA AQNLLGIPTTEKFPIASATGVSMLERFQTEIIPTVMEQGIWSGESLMRSRNGEEFPVSQVIIAHKNEQGEVEFLSTIARD IRDRQQIEARLRQQAQDLETTVQELQRTQTQMIQAEKMSSLGQLVAGVAHEINNPVNFIHGNLNYLEEHTQDLLRIIEVY QQKNPNYEPGLQDLHEEIDLEYIQQDLPKILNSMKVGTQRIRQIVLSLRTFSRMDEAEFKAVDIHAGIDSTLMILQHRLK EQPERPAVQVIKDYGTLPSVECYAGQLNQVFMNILANAIDALEDGIVKGEWVMGNGEIPTIRISTSVSGANWIRMAIADN GMGMSEKTQQQIFNPFFTTKPVGKGTGMGMSISYQIITEKHGGKLQCNSHPGKGTEFIIEIPIQQ
Sequences:
>Translated_705_residues MYNETLKQQINLLQQQNAQLKQQLAATTQESSAVIARLEQELSESKNLLLFFDISVDILCIADFNGHFQRVNQAGEDILG YSQAELLSLPFMELVHPEDRAATLAEMSKLSEGIRVFRLENRYRCKDGSYRWLSWTLVGHDNYILAMARDVSDSVELRSC KQTEVTLRQQEAQYRGIFETVNDGIGVIDLDTSKLVAVNPAFCEMHGYSQSEFLNLNPTDYIHAESYEKFGDFIKTVKAG QKYHTQAVGICKDGTSFDIEVTGKLLYYDGKPHAIAVVRDISERVEAEREQKRLLAILEATPDIVGIADASGINCYLNQA AQNLLGIPTTEKFPIASATGVSMLERFQTEIIPTVMEQGIWSGESLMRSRNGEEFPVSQVIIAHKNEQGEVEFLSTIARD IRDRQQIEARLRQQAQDLETTVQELQRTQTQMIQAEKMSSLGQLVAGVAHEINNPVNFIHGNLNYLEEHTQDLLRIIEVY QQKNPNYEPGLQDLHEEIDLEYIQQDLPKILNSMKVGTQRIRQIVLSLRTFSRMDEAEFKAVDIHAGIDSTLMILQHRLK EQPERPAVQVIKDYGTLPSVECYAGQLNQVFMNILANAIDALEDGIVKGEWVMGNGEIPTIRISTSVSGANWIRMAIADN GMGMSEKTQQQIFNPFFTTKPVGKGTGMGMSISYQIITEKHGGKLQCNSHPGKGTEFIIEIPIQQ >Mature_705_residues MYNETLKQQINLLQQQNAQLKQQLAATTQESSAVIARLEQELSESKNLLLFFDISVDILCIADFNGHFQRVNQAGEDILG YSQAELLSLPFMELVHPEDRAATLAEMSKLSEGIRVFRLENRYRCKDGSYRWLSWTLVGHDNYILAMARDVSDSVELRSC KQTEVTLRQQEAQYRGIFETVNDGIGVIDLDTSKLVAVNPAFCEMHGYSQSEFLNLNPTDYIHAESYEKFGDFIKTVKAG QKYHTQAVGICKDGTSFDIEVTGKLLYYDGKPHAIAVVRDISERVEAEREQKRLLAILEATPDIVGIADASGINCYLNQA AQNLLGIPTTEKFPIASATGVSMLERFQTEIIPTVMEQGIWSGESLMRSRNGEEFPVSQVIIAHKNEQGEVEFLSTIARD IRDRQQIEARLRQQAQDLETTVQELQRTQTQMIQAEKMSSLGQLVAGVAHEINNPVNFIHGNLNYLEEHTQDLLRIIEVY QQKNPNYEPGLQDLHEEIDLEYIQQDLPKILNSMKVGTQRIRQIVLSLRTFSRMDEAEFKAVDIHAGIDSTLMILQHRLK EQPERPAVQVIKDYGTLPSVECYAGQLNQVFMNILANAIDALEDGIVKGEWVMGNGEIPTIRISTSVSGANWIRMAIADN GMGMSEKTQQQIFNPFFTTKPVGKGTGMGMSISYQIITEKHGGKLQCNSHPGKGTEFIIEIPIQQ
Specific function: Phosphorylates the sporulation-regulatory protein spo0A under biofilm growth conditions. Also able to weakly phosphorylate spo0F [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 PAS (PER-ARNT-SIM) domains [H]
Homologues:
Organism=Escherichia coli, GI1788549, Length=283, Percent_Identity=30.0353356890459, Blast_Score=111, Evalue=2e-25, Organism=Escherichia coli, GI1790436, Length=278, Percent_Identity=27.3381294964029, Blast_Score=105, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 79355; Mature: 79355
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNETLKQQINLLQQQNAQLKQQLAATTQESSAVIARLEQELSESKNLLLFFDISVDILC CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEEE IADFNGHFQRVNQAGEDILGYSQAELLSLPFMELVHPEDRAATLAEMSKLSEGIRVFRLE EECCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCHHHHHHHHHHHHHCCEEEEEEC NRYRCKDGSYRWLSWTLVGHDNYILAMARDVSDSVELRSCKQTEVTLRQQEAQYRGIFET CCEECCCCCEEEEEEEEEECCCEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH VNDGIGVIDLDTSKLVAVNPAFCEMHGYSQSEFLNLNPTDYIHAESYEKFGDFIKTVKAG HCCCCEEEEECCCCEEEECCHHHHHCCCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHCC QKYHTQAVGICKDGTSFDIEVTGKLLYYDGKPHAIAVVRDISERVEAEREQKRLLAILEA CHHHHHEEEEECCCCEEEEEEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHC TPDIVGIADASGINCYLNQAAQNLLGIPTTEKFPIASATGVSMLERFQTEIIPTVMEQGI CCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC WSGESLMRSRNGEEFPVSQVIIAHKNEQGEVEFLSTIARDIRDRQQIEARLRQQAQDLET CCCHHHHHHCCCCCCCHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVQELQRTQTQMIQAEKMSSLGQLVAGVAHEINNPVNFIHGNLNYLEEHTQDLLRIIEVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHH QQKNPNYEPGLQDLHEEIDLEYIQQDLPKILNSMKVGTQRIRQIVLSLRTFSRMDEAEFK HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE AVDIHAGIDSTLMILQHRLKEQPERPAVQVIKDYGTLPSVECYAGQLNQVFMNILANAID EEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH ALEDGIVKGEWVMGNGEIPTIRISTSVSGANWIRMAIADNGMGMSEKTQQQIFNPFFTTK HHHCCCEECEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCC PVGKGTGMGMSISYQIITEKHGGKLQCNSHPGKGTEFIIEIPIQQ CCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCEEEEEECCCC >Mature Secondary Structure MYNETLKQQINLLQQQNAQLKQQLAATTQESSAVIARLEQELSESKNLLLFFDISVDILC CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEEE IADFNGHFQRVNQAGEDILGYSQAELLSLPFMELVHPEDRAATLAEMSKLSEGIRVFRLE EECCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCHHHHHHHHHHHHHCCEEEEEEC NRYRCKDGSYRWLSWTLVGHDNYILAMARDVSDSVELRSCKQTEVTLRQQEAQYRGIFET CCEECCCCCEEEEEEEEEECCCEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHH VNDGIGVIDLDTSKLVAVNPAFCEMHGYSQSEFLNLNPTDYIHAESYEKFGDFIKTVKAG HCCCCEEEEECCCCEEEECCHHHHHCCCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHCC QKYHTQAVGICKDGTSFDIEVTGKLLYYDGKPHAIAVVRDISERVEAEREQKRLLAILEA CHHHHHEEEEECCCCEEEEEEEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHC TPDIVGIADASGINCYLNQAAQNLLGIPTTEKFPIASATGVSMLERFQTEIIPTVMEQGI CCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC WSGESLMRSRNGEEFPVSQVIIAHKNEQGEVEFLSTIARDIRDRQQIEARLRQQAQDLET CCCHHHHHHCCCCCCCHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVQELQRTQTQMIQAEKMSSLGQLVAGVAHEINNPVNFIHGNLNYLEEHTQDLLRIIEVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHH QQKNPNYEPGLQDLHEEIDLEYIQQDLPKILNSMKVGTQRIRQIVLSLRTFSRMDEAEFK HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE AVDIHAGIDSTLMILQHRLKEQPERPAVQVIKDYGTLPSVECYAGQLNQVFMNILANAID EEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH ALEDGIVKGEWVMGNGEIPTIRISTSVSGANWIRMAIADNGMGMSEKTQQQIFNPFFTTK HHHCCCEECEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCC PVGKGTGMGMSISYQIITEKHGGKLQCNSHPGKGTEFIIEIPIQQ CCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]