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The map label for this gene is yvhJ [H]

Identifier: 17229971

GI number: 17229971

Start: 2976465

End: 2977895

Strand: Direct

Name: yvhJ [H]

Synonym: alr2479

Alternate gene names: 17229971

Gene position: 2976465-2977895 (Clockwise)

Preceding gene: 17229970

Following gene: 17229973

Centisome position: 46.41

GC content: 44.44

Gene sequence:

>1431_bases
GTGAGGAAGTCTGTGACCATTCAAAGAACTTCAGCAGAAGGAAATCCATCGTCAAACGCCCCTAACTCCAGTGGCAAAAA
TTCGCGCAATACGAAACCGGGGCGTTGGCTATGGTTTTGGATGGGTATGGGTGGAATTGCGATGGTATCAGCAACAGCCG
GAGCGCTATTAGCTGTTTCATTAACCAGTACACCATTGCAGCAAGCTCAACTCAGCCCCCAAGAAGAAGCAGTCTTTGAT
GGTGATGCCATCTCTGGTAGTGGATTACGTTTTTCTGAATTAACTCGGCCTGTGAATCTATTAGTCATGGGGATGAGCGT
ACTTCCACCAGATGTTCAAAATCCCCCTACTGAAACCCAAAATCTCCGCTACCTACCCCAGGTAAATTCCTTTGATGGTC
TTGCTGATGTCATGCTCATGGTGAAGTTTGACCCAGAGACCAAAAAAATTGCTATGCTTTCCATTCCCAGAGATACCCGC
ACGCGTATAGAAGGGCATGGAGTCAGAAAAATTAATGCCGCTAACGTGGAGGGTGGGCCTGCTTTAACTGCCACAACTGT
TAGTAATCTGTTGGGTGGTGTGGGTATTGATCGCTATATCCGCATTAACGTTTTGGGAGTTGGTAAACTCATTGATGCTT
TGGGCGGAGTGACAGTTTATGTCCCCAAAGATATGAAATATCAAGATCATTCCCAACACTTATATATTAATTTAAAGGCA
GGTAAACAGCATCTGAATGGCGACCAGGTACTACAATTACTCCGCTTTCGTCATGATGAACTAGGAGATATTGGCCGGAT
TCAACGCCAGCAAATGGTGATGCGTGCTTTAATGGATCAAGCTCTTAACCCTGTAACAGTAGCTCAGTTACCAAAAATTC
TCAACGTAGTTAAAGATAATATCGACACCAACTTGACAGTTGAGGAATTGGTAGCGCTAGTGGGTTTTGGTGTGCGGACT
AATCGCACCAATATGCAAATGTTAATGCTACCCGGACGTTTCAGCGAACCAAATGAGTATAATGCCAGCTATTGGATACC
AAGTAAAAATGGTATCGCTAAACTTATGGCACAGCATTTTGGTTTGGAATCTCTATCAGAAAACCCGGTAAATGATCCAA
CGGCTGTACGAGTGGCAATTCAGGATAGCACAGGTAGCGATCGCTCTCAACTACGTCCTTTAATTAATGCCTTAGAAAAA
GCCGGCTATCGTAACGTTTACGTGGCTAATGCTTGGACTGAACCCTTGGAAGTCACTAATATTATTGCCCAGCAAGGCGA
CGGCAACAGCGCTGAGTCCATTCGCAACGCCTTAGGTTTTGGCGAAGTGCGGGTAGAAAGCACTGGTAGTCTCAACTCAG
ATATTAGTATCCAAGTAGGCAAAGATTGGTTACAACAAAAATCTCTGTTAGAGGATTCTATTAAGTTCTAA

Upstream 100 bases:

>100_bases
AAAATAAAATGTCAATGTAATTGATTAAAAGTTAGCTATTATGGGTTGATTTATCTGCATTATTTTAAGTCAGCAAATTT
ACTTAATTCATCAGTATAGT

Downstream 100 bases:

>100_bases
TATCCCGTCAGGTAGGACTTATACCAATTCAAAATACCCTTTGCTACGCTACGCTACCGCGTAGCTTGCTTCCCCGTAGG
GTACAAAATTCAAAATCAAG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MRKSVTIQRTSAEGNPSSNAPNSSGKNSRNTKPGRWLWFWMGMGGIAMVSATAGALLAVSLTSTPLQQAQLSPQEEAVFD
GDAISGSGLRFSELTRPVNLLVMGMSVLPPDVQNPPTETQNLRYLPQVNSFDGLADVMLMVKFDPETKKIAMLSIPRDTR
TRIEGHGVRKINAANVEGGPALTATTVSNLLGGVGIDRYIRINVLGVGKLIDALGGVTVYVPKDMKYQDHSQHLYINLKA
GKQHLNGDQVLQLLRFRHDELGDIGRIQRQQMVMRALMDQALNPVTVAQLPKILNVVKDNIDTNLTVEELVALVGFGVRT
NRTNMQMLMLPGRFSEPNEYNASYWIPSKNGIAKLMAQHFGLESLSENPVNDPTAVRVAIQDSTGSDRSQLRPLINALEK
AGYRNVYVANAWTEPLEVTNIIAQQGDGNSAESIRNALGFGEVRVESTGSLNSDISIQVGKDWLQQKSLLEDSIKF

Sequences:

>Translated_476_residues
MRKSVTIQRTSAEGNPSSNAPNSSGKNSRNTKPGRWLWFWMGMGGIAMVSATAGALLAVSLTSTPLQQAQLSPQEEAVFD
GDAISGSGLRFSELTRPVNLLVMGMSVLPPDVQNPPTETQNLRYLPQVNSFDGLADVMLMVKFDPETKKIAMLSIPRDTR
TRIEGHGVRKINAANVEGGPALTATTVSNLLGGVGIDRYIRINVLGVGKLIDALGGVTVYVPKDMKYQDHSQHLYINLKA
GKQHLNGDQVLQLLRFRHDELGDIGRIQRQQMVMRALMDQALNPVTVAQLPKILNVVKDNIDTNLTVEELVALVGFGVRT
NRTNMQMLMLPGRFSEPNEYNASYWIPSKNGIAKLMAQHFGLESLSENPVNDPTAVRVAIQDSTGSDRSQLRPLINALEK
AGYRNVYVANAWTEPLEVTNIIAQQGDGNSAESIRNALGFGEVRVESTGSLNSDISIQVGKDWLQQKSLLEDSIKF
>Mature_476_residues
MRKSVTIQRTSAEGNPSSNAPNSSGKNSRNTKPGRWLWFWMGMGGIAMVSATAGALLAVSLTSTPLQQAQLSPQEEAVFD
GDAISGSGLRFSELTRPVNLLVMGMSVLPPDVQNPPTETQNLRYLPQVNSFDGLADVMLMVKFDPETKKIAMLSIPRDTR
TRIEGHGVRKINAANVEGGPALTATTVSNLLGGVGIDRYIRINVLGVGKLIDALGGVTVYVPKDMKYQDHSQHLYINLKA
GKQHLNGDQVLQLLRFRHDELGDIGRIQRQQMVMRALMDQALNPVTVAQLPKILNVVKDNIDTNLTVEELVALVGFGVRT
NRTNMQMLMLPGRFSEPNEYNASYWIPSKNGIAKLMAQHFGLESLSENPVNDPTAVRVAIQDSTGSDRSQLRPLINALEK
AGYRNVYVANAWTEPLEVTNIIAQQGDGNSAESIRNALGFGEVRVESTGSLNSDISIQVGKDWLQQKSLLEDSIKF

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 52057; Mature: 52057

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSVTIQRTSAEGNPSSNAPNSSGKNSRNTKPGRWLWFWMGMGGIAMVSATAGALLAVS
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCEEEEEE
LTSTPLQQAQLSPQEEAVFDGDAISGSGLRFSELTRPVNLLVMGMSVLPPDVQNPPTETQ
ECCCCHHHHHCCCCHHHEECCCCCCCCCCCHHHHHCCCEEEEECHHHCCCCCCCCCCCCC
NLRYLPQVNSFDGLADVMLMVKFDPETKKIAMLSIPRDTRTRIEGHGVRKINAANVEGGP
CEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCHHHHHHCCCCEEEEECCCCCCCC
ALTATTVSNLLGGVGIDRYIRINVLGVGKLIDALGGVTVYVPKDMKYQDHSQHLYINLKA
CCHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEC
GKQHLNGDQVLQLLRFRHDELGDIGRIQRQQMVMRALMDQALNPVTVAQLPKILNVVKDN
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
IDTNLTVEELVALVGFGVRTNRTNMQMLMLPGRFSEPNEYNASYWIPSKNGIAKLMAQHF
CCCCCCHHHHHHHHCCCCEECCCCEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHC
GLESLSENPVNDPTAVRVAIQDSTGSDRSQLRPLINALEKAGYRNVYVANAWTEPLEVTN
CHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH
IIAQQGDGNSAESIRNALGFGEVRVESTGSLNSDISIQVGKDWLQQKSLLEDSIKF
HHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKSVTIQRTSAEGNPSSNAPNSSGKNSRNTKPGRWLWFWMGMGGIAMVSATAGALLAVS
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCEEEEEE
LTSTPLQQAQLSPQEEAVFDGDAISGSGLRFSELTRPVNLLVMGMSVLPPDVQNPPTETQ
ECCCCHHHHHCCCCHHHEECCCCCCCCCCCHHHHHCCCEEEEECHHHCCCCCCCCCCCCC
NLRYLPQVNSFDGLADVMLMVKFDPETKKIAMLSIPRDTRTRIEGHGVRKINAANVEGGP
CEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCHHHHHHCCCCEEEEECCCCCCCC
ALTATTVSNLLGGVGIDRYIRINVLGVGKLIDALGGVTVYVPKDMKYQDHSQHLYINLKA
CCHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHCCEEEEECCCCCCCCCCCEEEEEEEC
GKQHLNGDQVLQLLRFRHDELGDIGRIQRQQMVMRALMDQALNPVTVAQLPKILNVVKDN
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
IDTNLTVEELVALVGFGVRTNRTNMQMLMLPGRFSEPNEYNASYWIPSKNGIAKLMAQHF
CCCCCCHHHHHHHHCCCCEECCCCEEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHC
GLESLSENPVNDPTAVRVAIQDSTGSDRSQLRPLINALEKAGYRNVYVANAWTEPLEVTN
CHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH
IIAQQGDGNSAESIRNALGFGEVRVESTGSLNSDISIQVGKDWLQQKSLLEDSIKF
HHHHCCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEEECHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]