| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17229956
Identifier: 17229956
GI number: 17229956
Start: 2962675
End: 2963763
Strand: Direct
Name: 17229956
Synonym: alr2464
Alternate gene names: NA
Gene position: 2962675-2963763 (Clockwise)
Preceding gene: 17229955
Following gene: 17229957
Centisome position: 46.19
GC content: 40.22
Gene sequence:
>1089_bases ATGCTAGACTATTCTGCTAACCCACTGTTTAATTCTCTGATGGATATTGCTACTAATATCCAAATTGAGCCGAACTTTTG TATCAACCATCCCAGTTATCAGCCTTTTGCTTTACCAACCAAAGTAGCAGATAGATTTCAGCACAACTCCCCTGCTCTAC AAAATAAATATCTCGCCTTATTGCTGCGTAACTTCCTTTATGGAATTTATTACAACGGTGTATTGCAAAGTAATTTGGCA ACTGACAACAATGCTAATTACTCGATGCCACAAAATTTAGCAACTAATACCAATGTGGGTATCGATTGGGAATTTTACGA ACAACTGCAAGCCAGTAATCACGGACGGGGTTATTTTGACCCTAGTTGGCAGGTGTTACGTAAGGAACCCGATGGTAGTA TGGCAGTGACTAAGAGTGGTTTAACTTTATACATAGAACCAGATTGCCATCTCAAACCCGGTAAAAAATCTGCGACTGTA GGGGAATCAGTAGCGATTTGGATGCCTAATAATCGATTGCAAAACGGCTACTACTTAGCTGTGAGTGATGTGGGACAGGA ACAGTCAGGAAACCCGGATGCTGATTTAGGTACAGGGAGAATCTATTTTAATTTCAGTGCAGATGGTGCGATCGCACTTA TGGATAGTTTAACAGCACAATTCAACGCCGCCGCACTTCCTTTTACCTTTCAAGTTCTGTACAATCCCTGCGCCTATGGA CGCTATGACTCAGGCGTACTCTATTTTGAACACGAAAACTATCCAGTAATACATAAAATTCTTCAGGTTATATATCAAGA GTATCAAGCTTATTTCCAGCCAGAGATACCCCTGTTTACCAAATTTTTAGCACCTGGGTTGAGTCTGGCTGAAGAACCTA CGCAAAAATTTGCCGCACAAGAGACTTTTGGCATGAATCGTTGTCAAATTGTGGCGAATGCTTTGTTAGAAGCTTGGCAG AAGGGTAAGAATGCAGTCGAAGAACGAATGAAGACGATTAACAAACACTTTCAACATCATTCTATAGATTTACAGCGTCC TTATCTTAACCCTACTTCTGAAGATATATATTCACCATTAAAGTTATAA
Upstream 100 bases:
>100_bases TTTGAATTTGTCATCGATTAGGTAAGAATTAATATTAGAGCCAGGATGTTTACCCTGTAGGGGTTTTCTAAATTATCAAT TTTGAGTTTGGAATTGATTG
Downstream 100 bases:
>100_bases ATTTTTCTTGCACAGTAATATGATTTTGTAGGGCGGACTTCTAGTCTGCTCTTTTTTTTATTTGGTAATTTTCCATATGC CTTTTACTTATCATCGGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MLDYSANPLFNSLMDIATNIQIEPNFCINHPSYQPFALPTKVADRFQHNSPALQNKYLALLLRNFLYGIYYNGVLQSNLA TDNNANYSMPQNLATNTNVGIDWEFYEQLQASNHGRGYFDPSWQVLRKEPDGSMAVTKSGLTLYIEPDCHLKPGKKSATV GESVAIWMPNNRLQNGYYLAVSDVGQEQSGNPDADLGTGRIYFNFSADGAIALMDSLTAQFNAAALPFTFQVLYNPCAYG RYDSGVLYFEHENYPVIHKILQVIYQEYQAYFQPEIPLFTKFLAPGLSLAEEPTQKFAAQETFGMNRCQIVANALLEAWQ KGKNAVEERMKTINKHFQHHSIDLQRPYLNPTSEDIYSPLKL
Sequences:
>Translated_362_residues MLDYSANPLFNSLMDIATNIQIEPNFCINHPSYQPFALPTKVADRFQHNSPALQNKYLALLLRNFLYGIYYNGVLQSNLA TDNNANYSMPQNLATNTNVGIDWEFYEQLQASNHGRGYFDPSWQVLRKEPDGSMAVTKSGLTLYIEPDCHLKPGKKSATV GESVAIWMPNNRLQNGYYLAVSDVGQEQSGNPDADLGTGRIYFNFSADGAIALMDSLTAQFNAAALPFTFQVLYNPCAYG RYDSGVLYFEHENYPVIHKILQVIYQEYQAYFQPEIPLFTKFLAPGLSLAEEPTQKFAAQETFGMNRCQIVANALLEAWQ KGKNAVEERMKTINKHFQHHSIDLQRPYLNPTSEDIYSPLKL >Mature_362_residues MLDYSANPLFNSLMDIATNIQIEPNFCINHPSYQPFALPTKVADRFQHNSPALQNKYLALLLRNFLYGIYYNGVLQSNLA TDNNANYSMPQNLATNTNVGIDWEFYEQLQASNHGRGYFDPSWQVLRKEPDGSMAVTKSGLTLYIEPDCHLKPGKKSATV GESVAIWMPNNRLQNGYYLAVSDVGQEQSGNPDADLGTGRIYFNFSADGAIALMDSLTAQFNAAALPFTFQVLYNPCAYG RYDSGVLYFEHENYPVIHKILQVIYQEYQAYFQPEIPLFTKFLAPGLSLAEEPTQKFAAQETFGMNRCQIVANALLEAWQ KGKNAVEERMKTINKHFQHHSIDLQRPYLNPTSEDIYSPLKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40964; Mature: 40964
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDYSANPLFNSLMDIATNIQIEPNFCINHPSYQPFALPTKVADRFQHNSPALQNKYLAL CCCCCCCHHHHHHHHHHHCCEECCCEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHH LLRNFLYGIYYNGVLQSNLATDNNANYSMPQNLATNTNVGIDWEFYEQLQASNHGRGYFD HHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC PSWQVLRKEPDGSMAVTKSGLTLYIEPDCHLKPGKKSATVGESVAIWMPNNRLQNGYYLA CCHHHEEECCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE VSDVGQEQSGNPDADLGTGRIYFNFSADGAIALMDSLTAQFNAAALPFTFQVLYNPCAYG EECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEHHCCCCCC RYDSGVLYFEHENYPVIHKILQVIYQEYQAYFQPEIPLFTKFLAPGLSLAEEPTQKFAAQ CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHH ETFGMNRCQIVANALLEAWQKGKNAVEERMKTINKHFQHHSIDLQRPYLNPTSEDIYSPL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCCC KL CC >Mature Secondary Structure MLDYSANPLFNSLMDIATNIQIEPNFCINHPSYQPFALPTKVADRFQHNSPALQNKYLAL CCCCCCCHHHHHHHHHHHCCEECCCEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHH LLRNFLYGIYYNGVLQSNLATDNNANYSMPQNLATNTNVGIDWEFYEQLQASNHGRGYFD HHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC PSWQVLRKEPDGSMAVTKSGLTLYIEPDCHLKPGKKSATVGESVAIWMPNNRLQNGYYLA CCHHHEEECCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEE VSDVGQEQSGNPDADLGTGRIYFNFSADGAIALMDSLTAQFNAAALPFTFQVLYNPCAYG EECCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEHHCCCCCC RYDSGVLYFEHENYPVIHKILQVIYQEYQAYFQPEIPLFTKFLAPGLSLAEEPTQKFAAQ CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHH ETFGMNRCQIVANALLEAWQKGKNAVEERMKTINKHFQHHSIDLQRPYLNPTSEDIYSPL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCCC KL CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA