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The map label for this gene is 17228887

Identifier: 17228887

GI number: 17228887

Start: 1654951

End: 1655823

Strand: Direct

Name: 17228887

Synonym: alr1392

Alternate gene names: NA

Gene position: 1654951-1655823 (Clockwise)

Preceding gene: 17228885

Following gene: 17228888

Centisome position: 25.8

GC content: 39.29

Gene sequence:

>873_bases
ATGCAAAGTACTACCAACCGTGATACATCCTTTGGTAATCTGCTAAAACACTGGCGGAATCAACGCAGTTTTAGTCAACT
CGATTTGGCTGTAGCCAGTGAAGTCTCTCAGAGACACATCAGCTTTCTGGAATCAGGTAGAGCAAAACCAAGTCGGGATA
TGATTTTGCAACTCGCTACTGTTTTAGATGTTCCGTTGCGTTACCAAAACATGATGCTGACATCTGCGGGTTTTGCGCCA
ATTTATTCCGAAAGTGATTTATCAGCATCAGAAATTGAACCTATCCGCAAAGCTTTAGATTTTATTTTGCGACAACAAGA
ACCATATCCAGCACTGGTAATGGATAGATACTGGAATCTGATTCAAAGTAATACAGCAGCGCAGCGACTAATCAATTGGT
TAGTTCCAACCCAACAGCTACAAAATCTGCTTGATAGCAACGGCAAATTTAATTTGATGCGATTTATGTTTCATCCTCAG
GGATTAAAACCTTTTATTGCTAATTGGGAAGAAATCGCTAACCATCTGATTCAACGAGTATATCGGGAAACCTTAGCGGA
AGGTTGTAGTCAAGACTCTATAAACCTTTTCCAAGAACTACAAACCTATCCAGATATTCCTCGCTTGTGGCAAATATCTC
ACACCTGCACGTGGCAAGTACCATTACTAACATTGCAGTTTGTCAAAAATGGATTGAGCCTGAGCTTCTTTTCGACAATT
GCTACCTTAGGAACACCCCATGATATAACCTTACAAGAATTAAGAATTGAAAGCCTATTTCCGGCAGATGAAGTGACGGA
AGAAAATCTACAAAAAATAGCAGTATCCTGTAATGACAACCATCAATCAATATTGGTAATAATAGATGATTAA

Upstream 100 bases:

>100_bases
CTTGCTTCATCAATCTTGTTGCTTTGATTATGAACAACGCAGATAATAAACACAATTACCTGTCAGGTAATCAAAATTAT
CAGATAAGCGAACGCCACAA

Downstream 100 bases:

>100_bases
TCCGTCAAAAACTCCCCTCTCGTTTCTCAAAAACTAATTATCCTATGGAGATTATAGATTTAACCCTATCGAAACACCGT
TGGTATCGTCGTCTACGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Xre Family xin-Antitoxin System Antitoxin Component; Helix-Turn-Helix Transcriptional Regulatory Protein; Xin-Antitoxin System Antitoxin Component Xre Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator XRE Family Protein; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator Xre Family

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MQSTTNRDTSFGNLLKHWRNQRSFSQLDLAVASEVSQRHISFLESGRAKPSRDMILQLATVLDVPLRYQNMMLTSAGFAP
IYSESDLSASEIEPIRKALDFILRQQEPYPALVMDRYWNLIQSNTAAQRLINWLVPTQQLQNLLDSNGKFNLMRFMFHPQ
GLKPFIANWEEIANHLIQRVYRETLAEGCSQDSINLFQELQTYPDIPRLWQISHTCTWQVPLLTLQFVKNGLSLSFFSTI
ATLGTPHDITLQELRIESLFPADEVTEENLQKIAVSCNDNHQSILVIIDD

Sequences:

>Translated_290_residues
MQSTTNRDTSFGNLLKHWRNQRSFSQLDLAVASEVSQRHISFLESGRAKPSRDMILQLATVLDVPLRYQNMMLTSAGFAP
IYSESDLSASEIEPIRKALDFILRQQEPYPALVMDRYWNLIQSNTAAQRLINWLVPTQQLQNLLDSNGKFNLMRFMFHPQ
GLKPFIANWEEIANHLIQRVYRETLAEGCSQDSINLFQELQTYPDIPRLWQISHTCTWQVPLLTLQFVKNGLSLSFFSTI
ATLGTPHDITLQELRIESLFPADEVTEENLQKIAVSCNDNHQSILVIIDD
>Mature_290_residues
MQSTTNRDTSFGNLLKHWRNQRSFSQLDLAVASEVSQRHISFLESGRAKPSRDMILQLATVLDVPLRYQNMMLTSAGFAP
IYSESDLSASEIEPIRKALDFILRQQEPYPALVMDRYWNLIQSNTAAQRLINWLVPTQQLQNLLDSNGKFNLMRFMFHPQ
GLKPFIANWEEIANHLIQRVYRETLAEGCSQDSINLFQELQTYPDIPRLWQISHTCTWQVPLLTLQFVKNGLSLSFFSTI
ATLGTPHDITLQELRIESLFPADEVTEENLQKIAVSCNDNHQSILVIIDD

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33352; Mature: 33352

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSTTNRDTSFGNLLKHWRNQRSFSQLDLAVASEVSQRHISFLESGRAKPSRDMILQLAT
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VLDVPLRYQNMMLTSAGFAPIYSESDLSASEIEPIRKALDFILRQQEPYPALVMDRYWNL
HHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
IQSNTAAQRLINWLVPTQQLQNLLDSNGKFNLMRFMFHPQGLKPFIANWEEIANHLIQRV
HHCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEHHEEECCCCCCHHHCCHHHHHHHHHHHH
YRETLAEGCSQDSINLFQELQTYPDIPRLWQISHTCTWQVPLLTLQFVKNGLSLSFFSTI
HHHHHHCCCCCCHHHHHHHHHHCCCCCHHEECCCCEEEHHHHHHHHHHHCCCCHHHHHHH
ATLGTPHDITLQELRIESLFPADEVTEENLQKIAVSCNDNHQSILVIIDD
HHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCEEEEEECC
>Mature Secondary Structure
MQSTTNRDTSFGNLLKHWRNQRSFSQLDLAVASEVSQRHISFLESGRAKPSRDMILQLAT
CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VLDVPLRYQNMMLTSAGFAPIYSESDLSASEIEPIRKALDFILRQQEPYPALVMDRYWNL
HHHCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
IQSNTAAQRLINWLVPTQQLQNLLDSNGKFNLMRFMFHPQGLKPFIANWEEIANHLIQRV
HHCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEHHEEECCCCCCHHHCCHHHHHHHHHHHH
YRETLAEGCSQDSINLFQELQTYPDIPRLWQISHTCTWQVPLLTLQFVKNGLSLSFFSTI
HHHHHHCCCCCCHHHHHHHHHHCCCCCHHEECCCCEEEHHHHHHHHHHHCCCCHHHHHHH
ATLGTPHDITLQELRIESLFPADEVTEENLQKIAVSCNDNHQSILVIIDD
HHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA