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The map label for this gene is 17228859

Identifier: 17228859

GI number: 17228859

Start: 1619595

End: 1620659

Strand: Direct

Name: 17228859

Synonym: alr1364

Alternate gene names: NA

Gene position: 1619595-1620659 (Clockwise)

Preceding gene: 17228857

Following gene: 17228861

Centisome position: 25.25

GC content: 39.15

Gene sequence:

>1065_bases
GTGATGGATGTAGATCACAAGACTAACCTAACCCTCAGGAAATACTTCTATACTTTGAAAAGTATGAAATTCACCTCAAT
CACCTATACATTGTCTGCCGTTTTGCTGCTGGGCTTTTCGATACCTTTAGTATTTGCACAAACACCGGATTCTGGTCTCT
CTGCTGATTGCCAAATGCCAATCCCACCAAACCTTAATTCTGTAGACCACTTCTTAGGTATGGGACACTTTCAGCAAGAC
TGTAAAAAAGATTTATCGGCGGCGGTTGCTGCTTTCTCTCAAGCGATTAAACTCAATCCCCAAGCTGAAGAACCATACTA
TCATCGAGCGAACTCCTACGCCGCAATGGGAAATTATCAAGCAGCCGTGACAGACTATACCGAAGTGATTAGGCAAAATA
CTGGTAGATTGGGTTTTAGTACTGGTGCATACTGGCACAGGGCTAGAGCTTATGAAAAGTTGGGTGAAAAACAGAAAGCA
ATTTCTGATTTAACTCAATTAATTGGTAATAACAGTAGCTTGAATGCTGAAGAATACTTATTTAGAGCCAATCTTTACAA
AGAATTAGGGAATAAAGAAAGTGCGATCGCTGACTATAAGATAGCAGAAAAACTGTTGCAGCAATATGCAGATGGAGTTT
TTCATACTGGGATGATGGATACCAGATATGAACAGATGTTGGATCAAGTCAGAAATGAGCTATCAAGTATGGGTGTAGCT
GTAACAGTACCTAAGACTACTACTGGTAATATTTTACGCACAATTGCTAAAACAGAAGTTGAACGGGCATTAAATTTAGC
TAGACTTCAGTCTCAACATCCTACAGTGAAAAACTTTGATGCTCAACTTCAGGATTTATATAAGCAACTAGCAAACACAC
AACCGCAAGTAGAGTCAGGGGTGGTAAAAAACCTGATAGCGAATGCAGCCTATGAGAAAATAGATGATCTAAAGATAGAG
CGATCGCAACTTTTGACAAAATATACCCTTGACAGTCCCATCATTGGCGTAATTGATAGCCAGACAAGCGAATTAGAATC
ATTAATTCACCGTAATAAATTTTAA

Upstream 100 bases:

>100_bases
GTAAGTTCGCTTTTAGTTACAAGGTATCAATGATAATCCTCGACCTACTCTTATGACAAATCAATTGCTTTCAAAGTTAA
ATTAGTTCTGTAGGGGTGTA

Downstream 100 bases:

>100_bases
TCATCATTAAAATATGAATTCCTGATGTAAAAACCCCGGTTCCTTCAAGAAATCGGGGTTTTGGGTCTGCGCGTATCTAA
ACTTGATTGAGCTATAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; Pentapeptide Repeat-Containing Serine/Threonine Kinase; Mitochondrial Outer Membrane; TPR Domain-Containing Protein

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MMDVDHKTNLTLRKYFYTLKSMKFTSITYTLSAVLLLGFSIPLVFAQTPDSGLSADCQMPIPPNLNSVDHFLGMGHFQQD
CKKDLSAAVAAFSQAIKLNPQAEEPYYHRANSYAAMGNYQAAVTDYTEVIRQNTGRLGFSTGAYWHRARAYEKLGEKQKA
ISDLTQLIGNNSSLNAEEYLFRANLYKELGNKESAIADYKIAEKLLQQYADGVFHTGMMDTRYEQMLDQVRNELSSMGVA
VTVPKTTTGNILRTIAKTEVERALNLARLQSQHPTVKNFDAQLQDLYKQLANTQPQVESGVVKNLIANAAYEKIDDLKIE
RSQLLTKYTLDSPIIGVIDSQTSELESLIHRNKF

Sequences:

>Translated_354_residues
MMDVDHKTNLTLRKYFYTLKSMKFTSITYTLSAVLLLGFSIPLVFAQTPDSGLSADCQMPIPPNLNSVDHFLGMGHFQQD
CKKDLSAAVAAFSQAIKLNPQAEEPYYHRANSYAAMGNYQAAVTDYTEVIRQNTGRLGFSTGAYWHRARAYEKLGEKQKA
ISDLTQLIGNNSSLNAEEYLFRANLYKELGNKESAIADYKIAEKLLQQYADGVFHTGMMDTRYEQMLDQVRNELSSMGVA
VTVPKTTTGNILRTIAKTEVERALNLARLQSQHPTVKNFDAQLQDLYKQLANTQPQVESGVVKNLIANAAYEKIDDLKIE
RSQLLTKYTLDSPIIGVIDSQTSELESLIHRNKF
>Mature_354_residues
MMDVDHKTNLTLRKYFYTLKSMKFTSITYTLSAVLLLGFSIPLVFAQTPDSGLSADCQMPIPPNLNSVDHFLGMGHFQQD
CKKDLSAAVAAFSQAIKLNPQAEEPYYHRANSYAAMGNYQAAVTDYTEVIRQNTGRLGFSTGAYWHRARAYEKLGEKQKA
ISDLTQLIGNNSSLNAEEYLFRANLYKELGNKESAIADYKIAEKLLQQYADGVFHTGMMDTRYEQMLDQVRNELSSMGVA
VTVPKTTTGNILRTIAKTEVERALNLARLQSQHPTVKNFDAQLQDLYKQLANTQPQVESGVVKNLIANAAYEKIDDLKIE
RSQLLTKYTLDSPIIGVIDSQTSELESLIHRNKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39763; Mature: 39763

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDVDHKTNLTLRKYFYTLKSMKFTSITYTLSAVLLLGFSIPLVFAQTPDSGLSADCQMP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCC
IPPNLNSVDHFLGMGHFQQDCKKDLSAAVAAFSQAIKLNPQAEEPYYHRANSYAAMGNYQ
CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHCCCCH
AAVTDYTEVIRQNTGRLGFSTGAYWHRARAYEKLGEKQKAISDLTQLIGNNSSLNAEEYL
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FRANLYKELGNKESAIADYKIAEKLLQQYADGVFHTGMMDTRYEQMLDQVRNELSSMGVA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHCCEE
VTVPKTTTGNILRTIAKTEVERALNLARLQSQHPTVKNFDAQLQDLYKQLANTQPQVESG
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
VVKNLIANAAYEKIDDLKIERSQLLTKYTLDSPIIGVIDSQTSELESLIHRNKF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCC
>Mature Secondary Structure
MMDVDHKTNLTLRKYFYTLKSMKFTSITYTLSAVLLLGFSIPLVFAQTPDSGLSADCQMP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCC
IPPNLNSVDHFLGMGHFQQDCKKDLSAAVAAFSQAIKLNPQAEEPYYHRANSYAAMGNYQ
CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHCCCCH
AAVTDYTEVIRQNTGRLGFSTGAYWHRARAYEKLGEKQKAISDLTQLIGNNSSLNAEEYL
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FRANLYKELGNKESAIADYKIAEKLLQQYADGVFHTGMMDTRYEQMLDQVRNELSSMGVA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHCCEE
VTVPKTTTGNILRTIAKTEVERALNLARLQSQHPTVKNFDAQLQDLYKQLANTQPQVESG
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
VVKNLIANAAYEKIDDLKIERSQLLTKYTLDSPIIGVIDSQTSELESLIHRNKF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA