| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228750
Identifier: 17228750
GI number: 17228750
Start: 1490270
End: 1491241
Strand: Direct
Name: 17228750
Synonym: alr1255
Alternate gene names: NA
Gene position: 1490270-1491241 (Clockwise)
Preceding gene: 17228749
Following gene: 17228752
Centisome position: 23.24
GC content: 43.52
Gene sequence:
>972_bases ATGACCATTTATAGCCCAGATACGATTAATTTTAATGGTGTGAGTGGCGATCGCTATTGGTTCGATGAACCTTTTCCTTA TACTGGAGTAGCCGATATTGATGAGCGCTTAAGTGGCTTCCCTGTCGCTGTATTTCTTCCTCATCATCGACCAAGACAAG AAACACCGCTAGTTATTGGTTTGCAAGGGATGTGTGCGCCCTATGGTTGGAATGCTTTTATTGTCCCTATACTGATAGAA ATGGGCATTGCTGTAGCTTTATTTGATCCACCATTGTCAGGGGAACGTAGTTTAGTACGCACCTCCACAACCTTAGTACA GAACGAAATTAAGCCATTGATAGACAGAGGTATTCCCTTTGATACTGCACTATTTTTATCTATCTTTCGCACCACCGCCC GTGATATTGGCAAAATCAGAGAATTTTGTGGCGATCGCTACGGACTCACTGACTCACGACTGGCATTATTTGGGGTGAGT ATGGGTGTATTGCTGTCTGCATACGCTTTCACCGCTAATAGTTTAGGGGATAGATTACTCGGAACCATTGGTCATGCTGA CCTCCCATCCTTTGCTAAAAGTTGGGGTCGTCCATTTTTACCTGACCTAGCAGCCTCTCCCTTGGGTGGTTTAGCAGAAT CATTATTGCAACGATTACAGCCAGATTTAGCCCCTTTATTCAACCTTTTACGATTAACCAAAAATCTCAAATACCAAGAC GAATATGCTTGGGATTGCAACCCCATGAACTATATTCAACAAGTCGAGTCACACCGTCGAGTCCGTTTTCTAATTGGTGC TAATGATTCCATTGTCAAAATAAAAGATGCTCGTGCTTGCGCGCAAAAATTCCCCGATGGTGATTGTTATATCGTCCCTG GTATGGGACATGGAACTAGACAATCAGGAGTTTCGTTTGTTGATCATGTACGCTATTTCTTAGCTACCCAATTAGGTGAT TGGCGGGGGTGA
Upstream 100 bases:
>100_bases CTACCAAACCTATATTTATTATCATTTTCAGGTGGGGTTTAAATCCCTGTCTGAAAATATCTTTAATTTTGAATTTTGAA TTTTGAATTTTGAATTACTT
Downstream 100 bases:
>100_bases AAGCAAAGAGCAGGGGGAGCAGGGGGAGCGAACCTCTACTGCAACACTGAGTTGAGAAATATCGATTTTCAACAATGGAT GTGAACTCATTAGTACAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTIYSPDTINFNGVSGDRYWFDEPFPYTGVADIDERLSGFPVAVFLPHHRPRQETPLVIGLQGMCAPYGWNAFIVPILIE MGIAVALFDPPLSGERSLVRTSTTLVQNEIKPLIDRGIPFDTALFLSIFRTTARDIGKIREFCGDRYGLTDSRLALFGVS MGVLLSAYAFTANSLGDRLLGTIGHADLPSFAKSWGRPFLPDLAASPLGGLAESLLQRLQPDLAPLFNLLRLTKNLKYQD EYAWDCNPMNYIQQVESHRRVRFLIGANDSIVKIKDARACAQKFPDGDCYIVPGMGHGTRQSGVSFVDHVRYFLATQLGD WRG
Sequences:
>Translated_323_residues MTIYSPDTINFNGVSGDRYWFDEPFPYTGVADIDERLSGFPVAVFLPHHRPRQETPLVIGLQGMCAPYGWNAFIVPILIE MGIAVALFDPPLSGERSLVRTSTTLVQNEIKPLIDRGIPFDTALFLSIFRTTARDIGKIREFCGDRYGLTDSRLALFGVS MGVLLSAYAFTANSLGDRLLGTIGHADLPSFAKSWGRPFLPDLAASPLGGLAESLLQRLQPDLAPLFNLLRLTKNLKYQD EYAWDCNPMNYIQQVESHRRVRFLIGANDSIVKIKDARACAQKFPDGDCYIVPGMGHGTRQSGVSFVDHVRYFLATQLGD WRG >Mature_322_residues TIYSPDTINFNGVSGDRYWFDEPFPYTGVADIDERLSGFPVAVFLPHHRPRQETPLVIGLQGMCAPYGWNAFIVPILIEM GIAVALFDPPLSGERSLVRTSTTLVQNEIKPLIDRGIPFDTALFLSIFRTTARDIGKIREFCGDRYGLTDSRLALFGVSM GVLLSAYAFTANSLGDRLLGTIGHADLPSFAKSWGRPFLPDLAASPLGGLAESLLQRLQPDLAPLFNLLRLTKNLKYQDE YAWDCNPMNYIQQVESHRRVRFLIGANDSIVKIKDARACAQKFPDGDCYIVPGMGHGTRQSGVSFVDHVRYFLATQLGDW RG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35924; Mature: 35792
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIYSPDTINFNGVSGDRYWFDEPFPYTGVADIDERLSGFPVAVFLPHHRPRQETPLVIG CCEECCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCEEEE LQGMCAPYGWNAFIVPILIEMGIAVALFDPPLSGERSLVRTSTTLVQNEIKPLIDRGIPF ECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH DTALFLSIFRTTARDIGKIREFCGDRYGLTDSRLALFGVSMGVLLSAYAFTANSLGDRLL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTIGHADLPSFAKSWGRPFLPDLAASPLGGLAESLLQRLQPDLAPLFNLLRLTKNLKYQD HHHCCCCCHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC EYAWDCNPMNYIQQVESHRRVRFLIGANDSIVKIKDARACAQKFPDGDCYIVPGMGHGTR CCCCCCCHHHHHHHHHHCCEEEEEEECCCCEEEEHHHHHHHHHCCCCCEEEECCCCCCCH QSGVSFVDHVRYFLATQLGDWRG HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TIYSPDTINFNGVSGDRYWFDEPFPYTGVADIDERLSGFPVAVFLPHHRPRQETPLVIG CEECCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCEEEE LQGMCAPYGWNAFIVPILIEMGIAVALFDPPLSGERSLVRTSTTLVQNEIKPLIDRGIPF ECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH DTALFLSIFRTTARDIGKIREFCGDRYGLTDSRLALFGVSMGVLLSAYAFTANSLGDRLL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTIGHADLPSFAKSWGRPFLPDLAASPLGGLAESLLQRLQPDLAPLFNLLRLTKNLKYQD HHHCCCCCHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC EYAWDCNPMNYIQQVESHRRVRFLIGANDSIVKIKDARACAQKFPDGDCYIVPGMGHGTR CCCCCCCHHHHHHHHHHCCEEEEEEECCCCEEEEHHHHHHHHHCCCCCEEEECCCCCCCH QSGVSFVDHVRYFLATQLGDWRG HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA