| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228729
Identifier: 17228729
GI number: 17228729
Start: 1463564
End: 1463860
Strand: Direct
Name: 17228729
Synonym: asr1234
Alternate gene names: NA
Gene position: 1463564-1463860 (Clockwise)
Preceding gene: 17228728
Following gene: 17228731
Centisome position: 22.82
GC content: 38.05
Gene sequence:
>297_bases ATGACTTCAATAAATTCAAAATCTCCAAAAATTTTTCGTCAAACTAAGCCGAATAAAAAACTGCCAACTTCGAGCAATTT GCTATACACAGGTTTGACCATAACCATGCTACTTTGTACATATGCTACAGCGAAAGCTCTTTATCCCTCCCTTGCGGATT TTTTCTCTGCTGCCAGTGGTGGTAGATTTGAGTCTACATCCATACCTTGGTTAAATAGTAAATCTGAATGTGAATACACT GGACGTTATTGGCGTGATAACCAATGTTGGGATAGTGAACATCAGCCAATGTTTTGA
Upstream 100 bases:
>100_bases ACCAGTAATATTTCCCTAGCAATCATCTGCATGACAGAGCAAGATTGAGTTACAACAAGGTGCATCCCATGAACTCACTC ATATTCATAGGGATTTAGAT
Downstream 100 bases:
>100_bases TTGCTAATTTTTCAGGACTTATGTAATTAATACATCAGCTTCAACTATGGGATTTGAATATTATTGATTGATAAGCTAAT AGTGTTGAGTTGAGAACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MTSINSKSPKIFRQTKPNKKLPTSSNLLYTGLTITMLLCTYATAKALYPSLADFFSAASGGRFESTSIPWLNSKSECEYT GRYWRDNQCWDSEHQPMF
Sequences:
>Translated_98_residues MTSINSKSPKIFRQTKPNKKLPTSSNLLYTGLTITMLLCTYATAKALYPSLADFFSAASGGRFESTSIPWLNSKSECEYT GRYWRDNQCWDSEHQPMF >Mature_97_residues TSINSKSPKIFRQTKPNKKLPTSSNLLYTGLTITMLLCTYATAKALYPSLADFFSAASGGRFESTSIPWLNSKSECEYTG RYWRDNQCWDSEHQPMF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11159; Mature: 11028
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSINSKSPKIFRQTKPNKKLPTSSNLLYTGLTITMLLCTYATAKALYPSLADFFSAASG CCCCCCCCCCEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GRFESTSIPWLNSKSECEYTGRYWRDNQCWDSEHQPMF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSINSKSPKIFRQTKPNKKLPTSSNLLYTGLTITMLLCTYATAKALYPSLADFFSAASG CCCCCCCCCEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GRFESTSIPWLNSKSECEYTGRYWRDNQCWDSEHQPMF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA