| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17228697
Identifier: 17228697
GI number: 17228697
Start: 1418141
End: 1418329
Strand: Direct
Name: 17228697
Synonym: asr1202
Alternate gene names: NA
Gene position: 1418141-1418329 (Clockwise)
Preceding gene: 17228696
Following gene: 17228698
Centisome position: 22.11
GC content: 40.74
Gene sequence:
>189_bases ATGTCAAACCAAATGCTAGCTTCTAATTTACTTGAAGATTTATCCTTAGATCAACAGCAATCTTTGGCTGGTGGTCAAAC CTTTGATGATGGAGATGATGAAGGCGGAAATACACGACTTGGCACTGGTGAAACTCGTCGCTATAGAATTAGAAGTGTCA GCATCGTTAGTGTCCGCAAATTGTCATAG
Upstream 100 bases:
>100_bases TAAATACTACTACAGAATAATTTAAATAAACAAGTGATATTGAATAATAAAAACATAGGTAATAACAAACCTATGTTGTA CGTAAGTGAGGTAAAAGTTC
Downstream 100 bases:
>100_bases TTAGTGGTGAATGGAGTGAACTGAAATAAACCGCTCAAAGCCTAATTGTATTTGAGCATTTCTACACCATCTCCTATTTT CTGCTAAATATAATTAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MSNQMLASNLLEDLSLDQQQSLAGGQTFDDGDDEGGNTRLGTGETRRYRIRSVSIVSVRKLS
Sequences:
>Translated_62_residues MSNQMLASNLLEDLSLDQQQSLAGGQTFDDGDDEGGNTRLGTGETRRYRIRSVSIVSVRKLS >Mature_61_residues SNQMLASNLLEDLSLDQQQSLAGGQTFDDGDDEGGNTRLGTGETRRYRIRSVSIVSVRKLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6789; Mature: 6657
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQMLASNLLEDLSLDQQQSLAGGQTFDDGDDEGGNTRLGTGETRRYRIRSVSIVSVRK CCCCHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEEEEEE LS CC >Mature Secondary Structure SNQMLASNLLEDLSLDQQQSLAGGQTFDDGDDEGGNTRLGTGETRRYRIRSVSIVSVRK CCCHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEEEEEE LS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA