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The map label for this gene is 17228678

Identifier: 17228678

GI number: 17228678

Start: 1392022

End: 1393587

Strand: Direct

Name: 17228678

Synonym: alr1183

Alternate gene names: NA

Gene position: 1392022-1393587 (Clockwise)

Preceding gene: 17228677

Following gene: 17228679

Centisome position: 21.7

GC content: 39.91

Gene sequence:

>1566_bases
ATGAATAAAAATATCAATTACAGGCAAAATAAATCTCTTGGCTTAATCAAGCTAATTACACCTCTAACATTGGCTGGTTC
TATGGTTATGGTGGGTAGTATATCAGCCCAAGCATTGCAATTTAATTTCACCTATGCACCAGGGACAACCCTAGACCAAA
TGCTCGGTTATGAGATGGCGGGTAAATATTGGTCAAATTATTTAGCCGATGATGTCACGGTCAATATCTTTATTGAGCCG
ACAAATAAGTTACCTACTAATGTCATTGGTGGGGCAATACCAGGGGTGACTTCGCAAAACTTTAGCACTGTTTATCAAAA
GCTGCAAACAGATATCACCTCAACTAGCGATCACATAGCTTTAAATAGTTTATATAACCAATGTCAGACCAGCCTTACCT
TTAGCAATGGATGGTTTCAGAATCAATGCACAGGATATAAATCTTTAACGAATACCTATAAAAATGGTCTAACTAACTTA
GATATTCACTCCGATGTCAAAAAGATCAATCTCACTCGTGCTAATGCCAAAGCTTTAGGAATGATTAGTGCTAATGACCC
TGGTTATGATGGTTATATTCTCGTGAGTAACTTAAGCAATATTGCTAGGCCTCTGTCATGGAATTATTTTTCTGCCACCA
ATACCAGTAGTACTATTCCTAACGCCACTCTAGACTTTTTCACTGTGGCGGTACATGAACTGACTCACACCCTCGGCTTT
ATCAGTGGTATAGACTTACCTGAATACCAAGATTTATTGACAAAAAAAACATGGTTAACCAGTGATGATATGTCTAAATA
TGGCTACCTGATGGATATGTTTCGTTTATCTGAGAATAGCCGCTTTTGGAATAGACCTGATATATCCGTTGGTGTAGATA
CGATGTTATCTCTTGATGGTGGTATGACCAAGTTAGGTAATATGTCTTCTGGAAGTACCAAATTTGGAGGAGATGGTAAT
CAAGGTAGTCACTGGAAAAAAGACGCTACCTATGATGGCATTATGGAGTCTAGTTTGGGTGCAGGCGGTACGAGAAAATT
TGTGACCAATAATGATCTGACTACTTTAGATATCTTGGGGTGGAATCTACAGCAGAACAATCAAGACCTACTCAGCACTT
TCAATAGTGCTAAATCTGGACTGGCTACTAAGATGGGAGTTACTACCAGTTGGATGGATGACAACCCTACTCAAGCAGCT
TTACTGCTAACACCACAATATATCGATGCTAATAACAATGGCTACGATGATCGCGGTGAATCCTTGAACCAGATGATCAA
TAGCAGTGGTACTTATAACTGGGGTTGGAATGGTTATTGGTGGGGTTGGAATGGCTATTGGTGGGGTTGGAATGGCTATT
GGCAAACTACGGACAATTTAACCACAGATGGCTTTTGGCAAAATTTCGCTTGGGAAACACTGGATGAGTATGAACATGGC
GACCATGACTATTTAAGTGGGTCTTCTCAGTCCCAATCTGTACCAGAACCCACTACTATCTTTGGATTATTTGGCATAGC
CATAATGGGCATTGCTACAAAGCTCAAGCGTCGTTGTGAATATTAG

Upstream 100 bases:

>100_bases
GAGGTAGCTCTTGAAGTCAAGAAGTAACCAACAATAACTCTCTTACTTCCTCAGCCTCAAGAGCCTCCTCAGCTTATCTG
TTTATCTTGAGCCTAATTCC

Downstream 100 bases:

>100_bases
CAAAGTGGAAGAGTTCTATTGTTAGTTTAGTTAGTTTTTGGGGAAATATACTTTAGTTAGCAAGAGAAGAGAGTATCCCA
TCCACAGACATAATCTGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MNKNINYRQNKSLGLIKLITPLTLAGSMVMVGSISAQALQFNFTYAPGTTLDQMLGYEMAGKYWSNYLADDVTVNIFIEP
TNKLPTNVIGGAIPGVTSQNFSTVYQKLQTDITSTSDHIALNSLYNQCQTSLTFSNGWFQNQCTGYKSLTNTYKNGLTNL
DIHSDVKKINLTRANAKALGMISANDPGYDGYILVSNLSNIARPLSWNYFSATNTSSTIPNATLDFFTVAVHELTHTLGF
ISGIDLPEYQDLLTKKTWLTSDDMSKYGYLMDMFRLSENSRFWNRPDISVGVDTMLSLDGGMTKLGNMSSGSTKFGGDGN
QGSHWKKDATYDGIMESSLGAGGTRKFVTNNDLTTLDILGWNLQQNNQDLLSTFNSAKSGLATKMGVTTSWMDDNPTQAA
LLLTPQYIDANNNGYDDRGESLNQMINSSGTYNWGWNGYWWGWNGYWWGWNGYWQTTDNLTTDGFWQNFAWETLDEYEHG
DHDYLSGSSQSQSVPEPTTIFGLFGIAIMGIATKLKRRCEY

Sequences:

>Translated_521_residues
MNKNINYRQNKSLGLIKLITPLTLAGSMVMVGSISAQALQFNFTYAPGTTLDQMLGYEMAGKYWSNYLADDVTVNIFIEP
TNKLPTNVIGGAIPGVTSQNFSTVYQKLQTDITSTSDHIALNSLYNQCQTSLTFSNGWFQNQCTGYKSLTNTYKNGLTNL
DIHSDVKKINLTRANAKALGMISANDPGYDGYILVSNLSNIARPLSWNYFSATNTSSTIPNATLDFFTVAVHELTHTLGF
ISGIDLPEYQDLLTKKTWLTSDDMSKYGYLMDMFRLSENSRFWNRPDISVGVDTMLSLDGGMTKLGNMSSGSTKFGGDGN
QGSHWKKDATYDGIMESSLGAGGTRKFVTNNDLTTLDILGWNLQQNNQDLLSTFNSAKSGLATKMGVTTSWMDDNPTQAA
LLLTPQYIDANNNGYDDRGESLNQMINSSGTYNWGWNGYWWGWNGYWWGWNGYWQTTDNLTTDGFWQNFAWETLDEYEHG
DHDYLSGSSQSQSVPEPTTIFGLFGIAIMGIATKLKRRCEY
>Mature_521_residues
MNKNINYRQNKSLGLIKLITPLTLAGSMVMVGSISAQALQFNFTYAPGTTLDQMLGYEMAGKYWSNYLADDVTVNIFIEP
TNKLPTNVIGGAIPGVTSQNFSTVYQKLQTDITSTSDHIALNSLYNQCQTSLTFSNGWFQNQCTGYKSLTNTYKNGLTNL
DIHSDVKKINLTRANAKALGMISANDPGYDGYILVSNLSNIARPLSWNYFSATNTSSTIPNATLDFFTVAVHELTHTLGF
ISGIDLPEYQDLLTKKTWLTSDDMSKYGYLMDMFRLSENSRFWNRPDISVGVDTMLSLDGGMTKLGNMSSGSTKFGGDGN
QGSHWKKDATYDGIMESSLGAGGTRKFVTNNDLTTLDILGWNLQQNNQDLLSTFNSAKSGLATKMGVTTSWMDDNPTQAA
LLLTPQYIDANNNGYDDRGESLNQMINSSGTYNWGWNGYWWGWNGYWWGWNGYWQTTDNLTTDGFWQNFAWETLDEYEHG
DHDYLSGSSQSQSVPEPTTIFGLFGIAIMGIATKLKRRCEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57994; Mature: 57994

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNINYRQNKSLGLIKLITPLTLAGSMVMVGSISAQALQFNFTYAPGTTLDQMLGYEMA
CCCCCCCCCCCCCCEEEHHHHHHHHCCEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHH
GKYWSNYLADDVTVNIFIEPTNKLPTNVIGGAIPGVTSQNFSTVYQKLQTDITSTSDHIA
HHHHHHHCCCCEEEEEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH
LNSLYNQCQTSLTFSNGWFQNQCTGYKSLTNTYKNGLTNLDIHSDVKKINLTRANAKALG
HHHHHHHHHHCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHEEEEECCCEEEE
MISANDPGYDGYILVSNLSNIARPLSWNYFSATNTSSTIPNATLDFFTVAVHELTHTLGF
EEECCCCCCCCEEEEECHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ISGIDLPEYQDLLTKKTWLTSDDMSKYGYLMDMFRLSENSRFWNRPDISVGVDTMLSLDG
HCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEECCC
GMTKLGNMSSGSTKFGGDGNQGSHWKKDATYDGIMESSLGAGGTRKFVTNNDLTTLDILG
CCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCEEEEEEE
WNLQQNNQDLLSTFNSAKSGLATKMGVTTSWMDDNPTQAALLLTPQYIDANNNGYDDRGE
CCCCCCCHHHHHHHHHHHHCCCHHCCCEEEECCCCCCCEEEEEECEEECCCCCCCCCHHH
SLNQMINSSGTYNWGWNGYWWGWNGYWWGWNGYWQTTDNLTTDGFWQNFAWETLDEYEHG
HHHHHHHCCCCCCCCCCCEEECCCCEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHCCC
DHDYLSGSSQSQSVPEPTTIFGLFGIAIMGIATKLKRRCEY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKNINYRQNKSLGLIKLITPLTLAGSMVMVGSISAQALQFNFTYAPGTTLDQMLGYEMA
CCCCCCCCCCCCCCEEEHHHHHHHHCCEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHH
GKYWSNYLADDVTVNIFIEPTNKLPTNVIGGAIPGVTSQNFSTVYQKLQTDITSTSDHIA
HHHHHHHCCCCEEEEEEEECCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH
LNSLYNQCQTSLTFSNGWFQNQCTGYKSLTNTYKNGLTNLDIHSDVKKINLTRANAKALG
HHHHHHHHHHCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHEEEEECCCEEEE
MISANDPGYDGYILVSNLSNIARPLSWNYFSATNTSSTIPNATLDFFTVAVHELTHTLGF
EEECCCCCCCCEEEEECHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ISGIDLPEYQDLLTKKTWLTSDDMSKYGYLMDMFRLSENSRFWNRPDISVGVDTMLSLDG
HCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEECCC
GMTKLGNMSSGSTKFGGDGNQGSHWKKDATYDGIMESSLGAGGTRKFVTNNDLTTLDILG
CCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCEEEEEEE
WNLQQNNQDLLSTFNSAKSGLATKMGVTTSWMDDNPTQAALLLTPQYIDANNNGYDDRGE
CCCCCCCHHHHHHHHHHHHCCCHHCCCEEEECCCCCCCEEEEEECEEECCCCCCCCCHHH
SLNQMINSSGTYNWGWNGYWWGWNGYWWGWNGYWQTTDNLTTDGFWQNFAWETLDEYEHG
HHHHHHHCCCCCCCCCCCEEECCCCEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHCCC
DHDYLSGSSQSQSVPEPTTIFGLFGIAIMGIATKLKRRCEY
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA