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The map label for this gene is yafM [C]

Identifier: 17228510

GI number: 17228510

Start: 1186435

End: 1187010

Strand: Direct

Name: yafM [C]

Synonym: alr1015

Alternate gene names: 17228510

Gene position: 1186435-1187010 (Clockwise)

Preceding gene: 17228509

Following gene: 17228511

Centisome position: 18.5

GC content: 34.55

Gene sequence:

>576_bases
ATGCCTGAATATCGTCGTGCATATTTGCCAGGTGGGACTTTCTTTTTAACATTGGTAACATACGAACGCTACCCAATATT
TTCCAATATAGAAAATATCTCTCACTTGCGTTCTGCTCTAGCAAAAGTACGTTCGGAAATGCCTTTTGAAATAGAGGGCG
CAGTTGTTTTGCCAGATCATATCCATTTTCTCTGGACTTTACCTACTGACGACAAAAATTATTCCCAACGAATTGGCAGA
TTAAAAGTTTTATTTACTCGTTCAATAGATAGTAAAACAATATTACCTAAAAATTTATCTAATTCACGCCGTAAACATCG
GGAAAGTAATGTATGGCAACGTCGTTTTTGGGAACATAACATACGTGATGAAGCTGATTTTGAAAAGCATTTGAACTATA
TCCATTACAATCCAGTTAAGCATGGTTTAGTTTCTTGTCCTCACTTATGGGATTATTCTAGTTTCCATAAATTTGTGAGA
AGAGGTATTTATTGTAGCAATTGGTATTGTTCATGTTCTGGGGAGAGAATACAAATACCTGATTTTGATAAAAATTTGGA
AAAAATTGGAGAATGA

Upstream 100 bases:

>100_bases
AAATAATTCAATCTCAGTAGGGTGGGCAATGCCCACCAAAAATATTATGTAAAAATACACACTAAAAATTGTTCCAAAAC
CTATAACTTAACTCACCGAA

Downstream 100 bases:

>100_bases
GTTTGGTTACTACATAATGAGATAATTGGTGGGCAATGCCCACCCTACTCAATATTCAAGAATTTAATAAACTAAATATG
AATACTATTCTCCATATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MPEYRRAYLPGGTFFLTLVTYERYPIFSNIENISHLRSALAKVRSEMPFEIEGAVVLPDHIHFLWTLPTDDKNYSQRIGR
LKVLFTRSIDSKTILPKNLSNSRRKHRESNVWQRRFWEHNIRDEADFEKHLNYIHYNPVKHGLVSCPHLWDYSSFHKFVR
RGIYCSNWYCSCSGERIQIPDFDKNLEKIGE

Sequences:

>Translated_191_residues
MPEYRRAYLPGGTFFLTLVTYERYPIFSNIENISHLRSALAKVRSEMPFEIEGAVVLPDHIHFLWTLPTDDKNYSQRIGR
LKVLFTRSIDSKTILPKNLSNSRRKHRESNVWQRRFWEHNIRDEADFEKHLNYIHYNPVKHGLVSCPHLWDYSSFHKFVR
RGIYCSNWYCSCSGERIQIPDFDKNLEKIGE
>Mature_190_residues
PEYRRAYLPGGTFFLTLVTYERYPIFSNIENISHLRSALAKVRSEMPFEIEGAVVLPDHIHFLWTLPTDDKNYSQRIGRL
KVLFTRSIDSKTILPKNLSNSRRKHRESNVWQRRFWEHNIRDEADFEKHLNYIHYNPVKHGLVSCPHLWDYSSFHKFVRR
GIYCSNWYCSCSGERIQIPDFDKNLEKIGE

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yafM [H]

Homologues:

Organism=Escherichia coli, GI1786422, Length=181, Percent_Identity=39.7790055248619, Blast_Score=127, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 22836; Mature: 22705

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEYRRAYLPGGTFFLTLVTYERYPIFSNIENISHLRSALAKVRSEMPFEIEGAVVLPDH
CCCCCCEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCEEECCCC
IHFLWTLPTDDKNYSQRIGRLKVLFTRSIDSKTILPKNLSNSRRKHRESNVWQRRFWEHN
EEEEEEECCCCCHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
IRDEADFEKHLNYIHYNPVKHGLVSCPHLWDYSSFHKFVRRGIYCSNWYCSCSGERIQIP
CCCCCCHHHHCCEEEECCHHHHHHCCCCCCCHHHHHHHHHCCCEECCEEEECCCCEEECC
DFDKNLEKIGE
CCHHHHHHHCC
>Mature Secondary Structure 
PEYRRAYLPGGTFFLTLVTYERYPIFSNIENISHLRSALAKVRSEMPFEIEGAVVLPDH
CCCCCEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCEEECCCC
IHFLWTLPTDDKNYSQRIGRLKVLFTRSIDSKTILPKNLSNSRRKHRESNVWQRRFWEHN
EEEEEEECCCCCHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
IRDEADFEKHLNYIHYNPVKHGLVSCPHLWDYSSFHKFVRRGIYCSNWYCSCSGERIQIP
CCCCCCHHHHCCEEEECCHHHHHHCCCCCCCHHHHHHHHHCCCEECCEEEECCCCEEECC
DFDKNLEKIGE
CCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]