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The map label for this gene is 17228442

Identifier: 17228442

GI number: 17228442

Start: 1100772

End: 1101599

Strand: Direct

Name: 17228442

Synonym: alr0947

Alternate gene names: NA

Gene position: 1100772-1101599 (Clockwise)

Preceding gene: 17228441

Following gene: 17228445

Centisome position: 17.16

GC content: 39.49

Gene sequence:

>828_bases
ATGCAAGATGCCTCAGCAATCACTGTTGTGATGGCGTTTTTTATCGCTTGGTTGGTGTGCTGGTTACCAATTGCAGCAGT
GTCATTGAAATTACTTAATTGGCAACCGATAAAACCGTTGCAACCAGAGCAAAAATTACCATTAATGATATCGCTCTATT
TATTAGCGCCTCTGGTGCTTTGGGGAGCTACTTGGTTAACTAATAGTTCTTTTGCAAATTATGGGATTGTTGGTAATTTC
GCCTTATTGAGTTCCTTAGCACTAGGCTTTAGCTTAGGAGTTTTAAGTATAGTTATTTTGTTTACCTGTCAATTGTGGTT
GGGTTGGTGCTATTTTAAAGAATCAAATATCAAGCAAATAGCATCTATCTCATTACCTATTTTATTGATAGCGTTATTGG
TGGGAGGAATAGAAGAATTAGTTTTTCGTGGTTTCCTGTTAACAGAATTAGAAAGAGACTATTCAGTATGGGCGGCAGGG
ATAATTTCTAGCCTGATTTTTGCCTTTTTACACTTAGTTTGGGAGCAACGGGAAACTTTACCCCAACTACCGGGGTTATG
GTTACTGGGAATGATGTTGGTGTTGGCAAGGATAAGCGATCGCGGTAACTTGGGTATAGCTTGGGGATTACATTCGGCTT
TAGTCTGGGCGATCGCTACTATAGATACAGCCCAATTAGTTACTTACACAGGTAAAGTCTCTGATTTTTGGACTGGGAAA
AACAAAAAACCCCTAGCTGGGGTAGCAGGGATTATCTGTGTTTTAGGAACTAGCCTGATACTTTGGTTTGCAACTGACAA
AATATCTTTTCCTGGGTATCCTTTTTAA

Upstream 100 bases:

>100_bases
TTTATAAGCCAAAAATTTATTCTGCAAATAGTCTACCGTGATTTTTGTGTTTAATTTGACAATCACCCTTACGCCATCCA
TCAACAATCTGCTGGCATTT

Downstream 100 bases:

>100_bases
CTAAAAAAAGAGGACACTCTGTATAACCCCGCGCCTCTTTGCGTTTAAAAAATTTATAGAATTTTGTGTAGTTTGTAAAA
ATGCGATCGCGCCACAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: CAAX Amino Terminal Protease Family; CAAX Amino Terminal Protease Family Protein; Abortive Infection Protein Like

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MQDASAITVVMAFFIAWLVCWLPIAAVSLKLLNWQPIKPLQPEQKLPLMISLYLLAPLVLWGATWLTNSSFANYGIVGNF
ALLSSLALGFSLGVLSIVILFTCQLWLGWCYFKESNIKQIASISLPILLIALLVGGIEELVFRGFLLTELERDYSVWAAG
IISSLIFAFLHLVWEQRETLPQLPGLWLLGMMLVLARISDRGNLGIAWGLHSALVWAIATIDTAQLVTYTGKVSDFWTGK
NKKPLAGVAGIICVLGTSLILWFATDKISFPGYPF

Sequences:

>Translated_275_residues
MQDASAITVVMAFFIAWLVCWLPIAAVSLKLLNWQPIKPLQPEQKLPLMISLYLLAPLVLWGATWLTNSSFANYGIVGNF
ALLSSLALGFSLGVLSIVILFTCQLWLGWCYFKESNIKQIASISLPILLIALLVGGIEELVFRGFLLTELERDYSVWAAG
IISSLIFAFLHLVWEQRETLPQLPGLWLLGMMLVLARISDRGNLGIAWGLHSALVWAIATIDTAQLVTYTGKVSDFWTGK
NKKPLAGVAGIICVLGTSLILWFATDKISFPGYPF
>Mature_275_residues
MQDASAITVVMAFFIAWLVCWLPIAAVSLKLLNWQPIKPLQPEQKLPLMISLYLLAPLVLWGATWLTNSSFANYGIVGNF
ALLSSLALGFSLGVLSIVILFTCQLWLGWCYFKESNIKQIASISLPILLIALLVGGIEELVFRGFLLTELERDYSVWAAG
IISSLIFAFLHLVWEQRETLPQLPGLWLLGMMLVLARISDRGNLGIAWGLHSALVWAIATIDTAQLVTYTGKVSDFWTGK
NKKPLAGVAGIICVLGTSLILWFATDKISFPGYPF

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30361; Mature: 30361

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDASAITVVMAFFIAWLVCWLPIAAVSLKLLNWQPIKPLQPEQKLPLMISLYLLAPLVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
WGATWLTNSSFANYGIVGNFALLSSLALGFSLGVLSIVILFTCQLWLGWCYFKESNIKQI
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ASISLPILLIALLVGGIEELVFRGFLLTELERDYSVWAAGIISSLIFAFLHLVWEQRETL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PQLPGLWLLGMMLVLARISDRGNLGIAWGLHSALVWAIATIDTAQLVTYTGKVSDFWTGK
CCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHEEECCCHHHCCCC
NKKPLAGVAGIICVLGTSLILWFATDKISFPGYPF
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQDASAITVVMAFFIAWLVCWLPIAAVSLKLLNWQPIKPLQPEQKLPLMISLYLLAPLVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
WGATWLTNSSFANYGIVGNFALLSSLALGFSLGVLSIVILFTCQLWLGWCYFKESNIKQI
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
ASISLPILLIALLVGGIEELVFRGFLLTELERDYSVWAAGIISSLIFAFLHLVWEQRETL
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PQLPGLWLLGMMLVLARISDRGNLGIAWGLHSALVWAIATIDTAQLVTYTGKVSDFWTGK
CCCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHEEECCCHHHCCCC
NKKPLAGVAGIICVLGTSLILWFATDKISFPGYPF
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA