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The map label for this gene is psbN

Identifier: 17228342

GI number: 17228342

Start: 971785

End: 971916

Strand: Direct

Name: psbN

Synonym: asr0847

Alternate gene names: 17228342

Gene position: 971785-971916 (Clockwise)

Preceding gene: 17228338

Following gene: 17228344

Centisome position: 15.15

GC content: 45.45

Gene sequence:

>132_bases
ATGGAACCCGCAATAGTTCTTATCATTTCTGTCGGTGCTGCTCTCGTCGCTGTGACTGGGTATGGGATTTATACTGCTTT
TGGCCCTCCTAGCAGAGAATTATCCGACCCTTTTGAAGATCATGAAGACTAA

Upstream 100 bases:

>100_bases
AGTGCGTTGTGCCATAGTTCACCTAAGATTAGTTGCCAAAGCTTTTTTTAATCTTCTGTAATATTCTATAAGAATAACAT
TCATCATCTATAACTCACTT

Downstream 100 bases:

>100_bases
ACAGTGTGTGAGAAATTGGGAGTGAGGAATGAGGGAATAGTAACGCTCCCTCCTCAAATCTCTCGTTTCCTTTCTCGTAC
CCAAGCTCTAGCCTTTGACT

Product: photosystem II reaction center protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 43; Mature: 43

Protein sequence:

>43_residues
MEPAIVLIISVGAALVAVTGYGIYTAFGPPSRELSDPFEDHED

Sequences:

>Translated_43_residues
MEPAIVLIISVGAALVAVTGYGIYTAFGPPSRELSDPFEDHED
>Mature_43_residues
MEPAIVLIISVGAALVAVTGYGIYTAFGPPSRELSDPFEDHED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbN family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBN_ANAVT (Q3M4N7)

Other databases:

- EMBL:   CP000117
- RefSeq:   YP_324944.1
- STRING:   Q3M4N7
- GeneID:   3680385
- GenomeReviews:   CP000117_GR
- KEGG:   ava:Ava_4451
- eggNOG:   NOG09654
- HOGENOM:   HBG710424
- ProtClustDB:   PRK13183
- BioCyc:   AVAR240292:AVA_4451-MONOMER
- GO:   GO:0015979
- HAMAP:   MF_00293
- InterPro:   IPR003398
- ProDom:   PD005510

Pfam domain/function: PF02468 PsbN

EC number: NA

Molecular weight: Translated: 4549; Mature: 4549

Theoretical pI: Translated: 3.73; Mature: 3.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xcb470f0)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPAIVLIISVGAALVAVTGYGIYTAFGPPSRELSDPFEDHED
CCCEEEEEEEHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCH
>Mature Secondary Structure
MEPAIVLIISVGAALVAVTGYGIYTAFGPPSRELSDPFEDHED
CCCEEEEEEEHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA