| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is cigR
Identifier: 16767046
GI number: 16767046
Start: 3960748
End: 3961227
Strand: Reverse
Name: cigR
Synonym: STM3762
Alternate gene names: NA
Gene position: 3961227-3960748 (Counterclockwise)
Preceding gene: 16767047
Following gene: 39546372
Centisome position: 81.55
GC content: 50.83
Gene sequence:
>480_bases ATGAATAATCGTCGTGGTTTAACCGCCGTCCTGGCGACGTTGATTACGTTTTCCCTGAGCGCTACGCCTGTGCTGGCGAA TCCGGGAAATGGTAATGGCGGCGGACATGGTAATAACGCGGCTAATCAGGGTAATAACGGTAACGGACATAAAGGAAATG CCGGGCAAAAAACGGAACACCGTAAAAATGGCGGTAAACCGGATCACGTCGAGTCGGACATTAGCTATGCTGTCGCCAGG CAACTGGCAGTGAATTTAGGGCTGACGGGTTATCAGTCTTTACCTCCGGGGATTGCGAAAAATCTGGCGAGAGGAAAACC GCTACCGCCGGGAATCGCTAAAAAAACGGTGCCGGCGTCTATGCTGGGACAATTACCTTATTATCCGGGCTATGAGTGGA AAATCGTTGGGGATAATCTGGTGCTGATCGCGCTCAGTACCGCGGTGGTCACGGCGATTATTAATGGCGTATTTGATTAA
Upstream 100 bases:
>100_bases CTGCTGTTGGCGAGCCCCGCTTAAAATAAGAATCGATGTAGTTGTTCTTTTTATGGCGGGGCGCTATTTTCATGGTATCC CACATCAGAAGGGCAATATC
Downstream 100 bases:
>100_bases GAGCCTATCCCACCAGGCGTTATTGGCGCAGCCAGTTTGGACACGGACAGCGCGCAAAAACCGGAGCGTACACGTAGTAC GTGAGGTTTGACTCGCTACG
Product: inner membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEHRKNGGKPDHVESDISYAVAR QLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPASMLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Sequences:
>Translated_159_residues MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEHRKNGGKPDHVESDISYAVAR QLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPASMLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD >Mature_159_residues MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEHRKNGGKPDHVESDISYAVAR QLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPASMLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16403; Mature: 16403
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH CCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS HHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHCCCHH MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD HHHCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHCCC >Mature Secondary Structure MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEH CCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH RKNGGKPDHVESDISYAVARQLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPAS HHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHCCCHH MLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD HHHCCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA