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The map label for this gene is ysaB

Identifier: 16766942

GI number: 16766942

Start: 3842899

End: 3843201

Strand: Reverse

Name: ysaB

Synonym: STM3657

Alternate gene names: 16766942

Gene position: 3843201-3842899 (Counterclockwise)

Preceding gene: 16766944

Following gene: 16766941

Centisome position: 79.12

GC content: 47.19

Gene sequence:

>303_bases
ATGATAATGAAGTATTTCTGTTCTGTGATGATAGCCATCGCTCTGGTGGGATGCACAGCGACACCTCCACCGACGCAAAA
AGCCCAGCAGAGTAAAGTGAGCCCAACACGCACGCTGGATATGGAAGCATTGTGTAAAGCTCAGGCGGCGCAGCGTTACA
ATACTGGCGCACAGAAAATTGCTGTTACCGGTTTCGAACAGTTTCAGGGGAGCTATGAGATGCGTGGTAATACTTTCCGT
AAAGAGAGTTTTGTCTGCTCTTTTGATGCAGATGGGCAGTTTTTACATCTTTCTATGCGGTAA

Upstream 100 bases:

>100_bases
TACGCTACATCTTGTGATGGCGTAAGGAGATTCGCACAATGTGTCTGCTACCCACAAACCTTAATAATAAGACTGACCAG
CAAACCAGACGGTAATAAAA

Downstream 100 bases:

>100_bases
AAGCCGCGCCTGGTGAGGTGTGATGCCGCGAAATCCGGCAATTTTCGCTAAACAAACCGGTTTCATACTGTATATCTCGC
ATCCAGCGGGTATACTGGCT

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MIMKYFCSVMIAIALVGCTATPPPTQKAQQSKVSPTRTLDMEALCKAQAAQRYNTGAQKIAVTGFEQFQGSYEMRGNTFR
KESFVCSFDADGQFLHLSMR

Sequences:

>Translated_100_residues
MIMKYFCSVMIAIALVGCTATPPPTQKAQQSKVSPTRTLDMEALCKAQAAQRYNTGAQKIAVTGFEQFQGSYEMRGNTFR
KESFVCSFDADGQFLHLSMR
>Mature_100_residues
MIMKYFCSVMIAIALVGCTATPPPTQKAQQSKVSPTRTLDMEALCKAQAAQRYNTGAQKIAVTGFEQFQGSYEMRGNTFR
KESFVCSFDADGQFLHLSMR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082291, Length=100, Percent_Identity=71, Blast_Score=147, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YSAB_SALCH (Q57IG4)

Other databases:

- EMBL:   AE017220
- RefSeq:   YP_218579.1
- GeneID:   3336113
- GenomeReviews:   AE017220_GR
- KEGG:   sec:SC3592
- HOGENOM:   HBG417180
- OMA:   QKIDVTG
- ProtClustDB:   CLSK880722
- BioCyc:   SENT321314:SCH_3592-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11113; Mature: 11113

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMKYFCSVMIAIALVGCTATPPPTQKAQQSKVSPTRTLDMEALCKAQAAQRYNTGAQKI
CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEE
AVTGFEQFQGSYEMRGNTFRKESFVCSFDADGQFLHLSMR
EEECHHHHCCCCCCCCCEECCCCEEEEECCCCCEEEEEEC
>Mature Secondary Structure
MIMKYFCSVMIAIALVGCTATPPPTQKAQQSKVSPTRTLDMEALCKAQAAQRYNTGAQKI
CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEE
AVTGFEQFQGSYEMRGNTFRKESFVCSFDADGQFLHLSMR
EEECHHHHCCCCCCCCCEECCCCEEEEECCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA