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The map label for this gene is yfdX [H]

Identifier: 16766332

GI number: 16766332

Start: 3192423

End: 3193055

Strand: Reverse

Name: yfdX [H]

Synonym: STM3030

Alternate gene names: 16766332

Gene position: 3193055-3192423 (Counterclockwise)

Preceding gene: 16766333

Following gene: 39546355

Centisome position: 65.74

GC content: 45.02

Gene sequence:

>633_bases
ATGAAAAGCCATATTATGCCAGGCGTTGCGCTGATGGTTATCCTGTTTTCAGGAAATATTATGGCCGCAACAAACATGAC
TGATAACGTTACTCTGAATAATGACAAGATATCCGGACAGGCCTGGCAGGCCATGCGTGATATCGGAATGTCGCGATTCG
AGTTGTTTAATGGTCGCACCCAAAAGGCGGAACAACTGGCTGCGCAAGCAGAAAAACTCCTGAACGATGACAGCACTGAC
TGGAATCTGTATGTCAAATCAGATAAAAAAGCCCCAGTTGAAGGAGACCACTATATTCGGATAAATTCATCGATTACGGT
AGCAGAAGATTATCTCCCTGCGGGCCAGAAAAATGATGCTATTAATAAAGCAAACCAGAAAATGAAAGAAGGAGATAAAA
AAGGGACTATAGAGGCCCTGAAACTAGCAGGCGTCAGTGTTATTGAAAATCAGGAACTCATTCCTCTTCAGCAAACCCGT
AAGGATGTGACCACAGCGCTTTCCTTGATGAACGAAGGAAAATACTATCAGGCAGGTCTGTTACTGAAATCAGCTCAGGA
TGGCATAGTTGTAGACTCTCAGTCAGTTCAGGAATCACCCACGCACTCCGTGCAGCACGACGCCGCGCATTAA

Upstream 100 bases:

>100_bases
AGCGGAAGCCTTAATAGCAATGGTTTTAATCTTGGCGTGGGTTACCGGTTCTGAATAGGATAATCCGATAAAAAATGTTA
CTTTGTGGAGATGATGGATT

Downstream 100 bases:

>100_bases
TATCCCCCAGCCTGCTGTATACATTACAGCAGGCAGCATTATGTCTGACAGCTATTACCAGTTTGTTCTTTGCTGTCGGC
ATTGTTTTTAAATTTCATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKSHIMPGVALMVILFSGNIMAATNMTDNVTLNNDKISGQAWQAMRDIGMSRFELFNGRTQKAEQLAAQAEKLLNDDSTD
WNLYVKSDKKAPVEGDHYIRINSSITVAEDYLPAGQKNDAINKANQKMKEGDKKGTIEALKLAGVSVIENQELIPLQQTR
KDVTTALSLMNEGKYYQAGLLLKSAQDGIVVDSQSVQESPTHSVQHDAAH

Sequences:

>Translated_210_residues
MKSHIMPGVALMVILFSGNIMAATNMTDNVTLNNDKISGQAWQAMRDIGMSRFELFNGRTQKAEQLAAQAEKLLNDDSTD
WNLYVKSDKKAPVEGDHYIRINSSITVAEDYLPAGQKNDAINKANQKMKEGDKKGTIEALKLAGVSVIENQELIPLQQTR
KDVTTALSLMNEGKYYQAGLLLKSAQDGIVVDSQSVQESPTHSVQHDAAH
>Mature_210_residues
MKSHIMPGVALMVILFSGNIMAATNMTDNVTLNNDKISGQAWQAMRDIGMSRFELFNGRTQKAEQLAAQAEKLLNDDSTD
WNLYVKSDKKAPVEGDHYIRINSSITVAEDYLPAGQKNDAINKANQKMKEGDKKGTIEALKLAGVSVIENQELIPLQQTR
KDVTTALSLMNEGKYYQAGLLLKSAQDGIVVDSQSVQESPTHSVQHDAAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788719, Length=162, Percent_Identity=46.9135802469136, Blast_Score=157, Evalue=7e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021236 [H]

Pfam domain/function: PF10938 YfdX [H]

EC number: NA

Molecular weight: Translated: 23075; Mature: 23075

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSHIMPGVALMVILFSGNIMAATNMTDNVTLNNDKISGQAWQAMRDIGMSRFELFNGRT
CCCCCCCHHHHHHHHHCCCEEEECCCCCCEEECCCCCCCHHHHHHHHCCHHHHHHHCCCC
QKAEQLAAQAEKLLNDDSTDWNLYVKSDKKAPVEGDHYIRINSSITVAEDYLPAGQKNDA
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEECCCEEEHHHCCCCCCCCCH
INKANQKMKEGDKKGTIEALKLAGVSVIENQELIPLQQTRKDVTTALSLMNEGKYYQAGL
HHHHHHHHHCCCCCCCHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
LLKSAQDGIVVDSQSVQESPTHSVQHDAAH
EEECCCCCEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKSHIMPGVALMVILFSGNIMAATNMTDNVTLNNDKISGQAWQAMRDIGMSRFELFNGRT
CCCCCCCHHHHHHHHHCCCEEEECCCCCCEEECCCCCCCHHHHHHHHCCHHHHHHHCCCC
QKAEQLAAQAEKLLNDDSTDWNLYVKSDKKAPVEGDHYIRINSSITVAEDYLPAGQKNDA
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEECCCEEEHHHCCCCCCCCCH
INKANQKMKEGDKKGTIEALKLAGVSVIENQELIPLQQTRKDVTTALSLMNEGKYYQAGL
HHHHHHHHHCCCCCCCHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
LLKSAQDGIVVDSQSVQESPTHSVQHDAAH
EEECCCCCEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]