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The map label for this gene is yqcA [H]

Identifier: 16766269

GI number: 16766269

Start: 3115076

End: 3115525

Strand: Reverse

Name: yqcA [H]

Synonym: STM2963

Alternate gene names: 16766269

Gene position: 3115525-3115076 (Counterclockwise)

Preceding gene: 16766270

Following gene: 16766268

Centisome position: 64.14

GC content: 54.0

Gene sequence:

>450_bases
ATGGCGGAAATTGGTATTTTTGTCGGGACCATGTATGGCAACTCACTGCTGGTGGCGGAAGAAGCGGAAGCGATCCTCGC
CAGACAGGGCCACAGCGCGACCGTGTTTGAAGATCCTGAACTGTCCGACTGGCAGCAATATCAGGATAAGGTTGCGCTGG
TCGTTACCTCGACGACCGGGCAGGGCGATCTACCGGATAGCATTGCGCCGCTCTTTCACGGCATTAAAGATACAGTCGGT
TTTCAACCAAACCTGCGTTACGGGGTGATTGCGTTAGGTGATAGCAGCTACCCCAATTTCTGTAATGGCGGCAAACAGTT
TGATGCCCTGTTGCAAGAGCAAAGCGCGCAGCGGGTGGGGGAGATGTTATTCATTGACGCCAGCGAACATCCGGAGCCGG
AGAGCCAGTCCAATCCCTGGGTTGAAAACTGGGGAACTTTACTTTCCTGA

Upstream 100 bases:

>100_bases
TGGCTGGCGTGGACTTCTCCCTGACAATGAAAGGGTTGAGTTTACGGCGGCGTCCCGGCAGGATGAGACTCATCTGACAT
AATTCAGGGAGATACGCATA

Downstream 100 bases:

>100_bases
GGTAAATCCCTCCCCCCTACGGGAGGGTACCTTTTCGTTTGCTTGCGTTGCCAGTAAGCAAAATCATGACCTGTACACAG
TGTAAAGTAACTGAATCGTG

Product: flavodoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MAEIGIFVGTMYGNSLLVAEEAEAILARQGHSATVFEDPELSDWQQYQDKVALVVTSTTGQGDLPDSIAPLFHGIKDTVG
FQPNLRYGVIALGDSSYPNFCNGGKQFDALLQEQSAQRVGEMLFIDASEHPEPESQSNPWVENWGTLLS

Sequences:

>Translated_149_residues
MAEIGIFVGTMYGNSLLVAEEAEAILARQGHSATVFEDPELSDWQQYQDKVALVVTSTTGQGDLPDSIAPLFHGIKDTVG
FQPNLRYGVIALGDSSYPNFCNGGKQFDALLQEQSAQRVGEMLFIDASEHPEPESQSNPWVENWGTLLS
>Mature_148_residues
AEIGIFVGTMYGNSLLVAEEAEAILARQGHSATVFEDPELSDWQQYQDKVALVVTSTTGQGDLPDSIAPLFHGIKDTVGF
QPNLRYGVIALGDSSYPNFCNGGKQFDALLQEQSAQRVGEMLFIDASEHPEPESQSNPWVENWGTLLS

Specific function: Probable electron transporter [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Homo sapiens, GI169790958, Length=122, Percent_Identity=37.7049180327869, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI169790956, Length=122, Percent_Identity=37.7049180327869, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1789154, Length=149, Percent_Identity=88.5906040268456, Blast_Score=273, Evalue=3e-75,
Organism=Escherichia coli, GI1790181, Length=149, Percent_Identity=29.5302013422819, Blast_Score=80, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001094
- InterPro:   IPR008254 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 16249; Mature: 16118

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEIGIFVGTMYGNSLLVAEEAEAILARQGHSATVFEDPELSDWQQYQDKVALVVTSTTG
CCCCEEEEEECCCCEEEEEHHHHHHHHCCCCCCEEECCCCCCHHHHHCCEEEEEEEECCC
QGDLPDSIAPLFHGIKDTVGFQPNLRYGVIALGDSSYPNFCNGGKQFDALLQEQSAQRVG
CCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHC
EMLFIDASEHPEPESQSNPWVENWGTLLS
CEEEEECCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
AEIGIFVGTMYGNSLLVAEEAEAILARQGHSATVFEDPELSDWQQYQDKVALVVTSTTG
CCCEEEEEECCCCEEEEEHHHHHHHHCCCCCCEEECCCCCCHHHHHCCEEEEEEEECCC
QGDLPDSIAPLFHGIKDTVGFQPNLRYGVIALGDSSYPNFCNGGKQFDALLQEQSAQRVG
CCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHC
EMLFIDASEHPEPESQSNPWVENWGTLLS
CEEEEECCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]