| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is gudT [H]
Identifier: 16766268
GI number: 16766268
Start: 3113237
End: 3114595
Strand: Reverse
Name: gudT [H]
Synonym: STM2962
Alternate gene names: 16766268
Gene position: 3114595-3113237 (Counterclockwise)
Preceding gene: 16766269
Following gene: 16766267
Centisome position: 64.12
GC content: 52.24
Gene sequence:
>1359_bases ATGAGTTCATTAAGTCACGCGGCGAGCAGTGCGGAGAAACGCACGAACGCCCGCTACTGGATAGTGGTGATGCTGTTTAT CGTCACATCCTTCAACTACGGCGACCGCGCCACATTGTCCATTGCCGGCTCAGAAATGGCCAAAGATATCGGCCTTGATC CGGTAGGCATGGGCTATGTTTTTTCTGCTTTTTCATGGGCCTATGTTATCGGGCAGATCCCGGGCGGCTGGCTGCTGGAC CGCTTTGGTTCCAAACGCGTCTATTTCTGGTCTATTTTCATTTGGTCAGTCTTCACCCTGTTGCAGGGTTTTGTCGATAT CTTTAGTGGTTTCGGCATTATTGTCGCCCTCTTTACGCTTCGTTTCCTGGTTGGTCTGGCGGAATCGCCTTCTTTCCCGG GCAACAGTCGCATTGTTGCAGCCTGGTTCCCGGCGCAGGAGAGGGGAACGGCGGTGGCCATCTTTAACTCCGCGCAATAC TTTGCCACGGTTATTTTCGCGCCGATTATGGGCTGGCTGACGCACGAAGTGGGCTGGTCGCATGTCTTCTTCTTTATGGG CGGGTTAGGGATCATCATCAGCTTTATCTGGTTGAAAGTTATCCATGAACCAAATAACCATCCGGGCGTAAATAAGAAAG AGTTGGAGTACATCGCAGAAGGCGGCGCGCTGATCAATATGGATCAGAAAGACACCAAAGCGAAAGTACCGTTTAGCGTC AAATGGGGCCAGATCAAACAGCTGCTGGGCTCTCGTATGATGATTGGCGTTTACATCGGTCAGTACTGTATTAACGCATT GACCTATTTCTTTATTACCTGGTTCCCGGTCTATTTGGTCCAGGCGCGCGGCATGTCGATTCTCAAAGCGGGCTTTGTCG CCTCGGTTCCTGCGGTCTGCGGCTTTATCGGCGGCGTGTTGGGCGGCATCATTTCCGACTGGCTGATGCGTCGTACCGGC TCCCTGAATATCGCGCGCAAGACGCCGATTGTGCTGGGGATGTTGCTGTCAATGGTCATGGTGTTCTGTAACTATGTGAA CGTGGAATGGATGATCATCGGCTTTATGGCGTTGGCCTTCTTCGGTAAAGGTATCGGCGCGTTGGGCTGGGCAGTAATGG CGGATACCGCGCCGAAAGAGATCAGCGGTCTTTCCGGCGGCTTGTTTAATATGTTCGGCAATATTTCCGGTATTGTGACG CCAATCGCGATTGGTTACATCGTTGGCACCACCGGTTCCTTCAACGGCGCGTTGATCTATGTCGGCGTACATGCCCTGGT GGCCATCATCAGCTATCTGGTGCTGGTAGGCGATATTAAGCGTATTGAACTGAAACCTGTCGCAGGACAATTATCATGA
Upstream 100 bases:
>100_bases ACCTAATAAAAGCTGCAACAAGGAAACGTTATCTCTGATTCCCTACCGGTTGTGCAGTTCAGAGTGAGCGTAGCTAACGC GAAATTTCAGGAGTGCAACA
Downstream 100 bases:
>100_bases CAACGCAATCCAGTCCCGTTATTACGGACATGAAGGTCATTCCGGTTGCCGGACATGACAGTATGCTACTCAACATCGGC GGCGCGCATAACGCGTACTT
Product: D-glucarate permease
Products: NA
Alternate protein names: D-glucarate permease [H]
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MSSLSHAASSAEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLD RFGSKRVYFWSIFIWSVFTLLQGFVDIFSGFGIIVALFTLRFLVGLAESPSFPGNSRIVAAWFPAQERGTAVAIFNSAQY FATVIFAPIMGWLTHEVGWSHVFFFMGGLGIIISFIWLKVIHEPNNHPGVNKKELEYIAEGGALINMDQKDTKAKVPFSV KWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTG SLNIARKTPIVLGMLLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGALGWAVMADTAPKEISGLSGGLFNMFGNISGIVT PIAIGYIVGTTGSFNGALIYVGVHALVAIISYLVLVGDIKRIELKPVAGQLS
Sequences:
>Translated_452_residues MSSLSHAASSAEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLD RFGSKRVYFWSIFIWSVFTLLQGFVDIFSGFGIIVALFTLRFLVGLAESPSFPGNSRIVAAWFPAQERGTAVAIFNSAQY FATVIFAPIMGWLTHEVGWSHVFFFMGGLGIIISFIWLKVIHEPNNHPGVNKKELEYIAEGGALINMDQKDTKAKVPFSV KWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTG SLNIARKTPIVLGMLLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGALGWAVMADTAPKEISGLSGGLFNMFGNISGIVT PIAIGYIVGTTGSFNGALIYVGVHALVAIISYLVLVGDIKRIELKPVAGQLS >Mature_451_residues SSLSHAASSAEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLDR FGSKRVYFWSIFIWSVFTLLQGFVDIFSGFGIIVALFTLRFLVGLAESPSFPGNSRIVAAWFPAQERGTAVAIFNSAQYF ATVIFAPIMGWLTHEVGWSHVFFFMGGLGIIISFIWLKVIHEPNNHPGVNKKELEYIAEGGALINMDQKDTKAKVPFSVK WGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTGS LNIARKTPIVLGMLLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGALGWAVMADTAPKEISGLSGGLFNMFGNISGIVTP IAIGYIVGTTGSFNGALIYVGVHALVAIISYLVLVGDIKRIELKPVAGQLS
Specific function: Uptake of D-glucarate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI9945322, Length=409, Percent_Identity=28.1173594132029, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI9966811, Length=410, Percent_Identity=28.0487804878049, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI21322234, Length=413, Percent_Identity=26.1501210653753, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI4885441, Length=379, Percent_Identity=26.1213720316623, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI148743791, Length=395, Percent_Identity=25.0632911392405, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI6912666, Length=371, Percent_Identity=25.6064690026954, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI5031955, Length=268, Percent_Identity=25.3731343283582, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI154350196, Length=427, Percent_Identity=22.4824355971897, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI223718438, Length=232, Percent_Identity=27.1551724137931, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI256219598, Length=379, Percent_Identity=23.7467018469657, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI4503847, Length=379, Percent_Identity=23.7467018469657, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI256219483, Length=379, Percent_Identity=23.7467018469657, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI148728191, Length=306, Percent_Identity=23.8562091503268, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI256219543, Length=295, Percent_Identity=25.0847457627119, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI256219564, Length=309, Percent_Identity=23.3009708737864, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1789152, Length=450, Percent_Identity=96.6666666666667, Blast_Score=879, Evalue=0.0, Organism=Escherichia coli, GI1789515, Length=437, Percent_Identity=57.6659038901602, Blast_Score=545, Evalue=1e-156, Organism=Escherichia coli, GI87082320, Length=435, Percent_Identity=42.7586206896552, Blast_Score=359, Evalue=1e-100, Organism=Escherichia coli, GI2367379, Length=419, Percent_Identity=28.1622911694511, Blast_Score=162, Evalue=6e-41, Organism=Escherichia coli, GI2367193, Length=381, Percent_Identity=24.4094488188976, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788573, Length=449, Percent_Identity=22.4944320712695, Blast_Score=71, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115533554, Length=431, Percent_Identity=28.538283062645, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI115533556, Length=431, Percent_Identity=28.538283062645, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17552542, Length=414, Percent_Identity=25.8454106280193, Blast_Score=102, Evalue=6e-22, Organism=Caenorhabditis elegans, GI71991448, Length=375, Percent_Identity=24.2666666666667, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71991453, Length=375, Percent_Identity=24.2666666666667, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17560030, Length=400, Percent_Identity=25, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17535049, Length=440, Percent_Identity=23.6363636363636, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193205400, Length=305, Percent_Identity=23.6065573770492, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17569727, Length=384, Percent_Identity=23.9583333333333, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI32565916, Length=256, Percent_Identity=23.828125, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI32565914, Length=256, Percent_Identity=23.828125, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17532009, Length=382, Percent_Identity=23.5602094240838, Blast_Score=78, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17554148, Length=355, Percent_Identity=23.6619718309859, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71997452, Length=320, Percent_Identity=20.3125, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25145964, Length=286, Percent_Identity=21.6783216783217, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17560966, Length=324, Percent_Identity=23.4567901234568, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17509575, Length=237, Percent_Identity=27.0042194092827, Blast_Score=68, Evalue=8e-12, Organism=Caenorhabditis elegans, GI71989129, Length=263, Percent_Identity=25.4752851711027, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI115534592, Length=226, Percent_Identity=25.6637168141593, Blast_Score=66, Evalue=4e-11, Organism=Caenorhabditis elegans, GI193208223, Length=284, Percent_Identity=26.4084507042254, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI24641682, Length=383, Percent_Identity=26.3707571801567, Blast_Score=122, Evalue=5e-28, Organism=Drosophila melanogaster, GI45550460, Length=416, Percent_Identity=25.9615384615385, Blast_Score=122, Evalue=6e-28, Organism=Drosophila melanogaster, GI24655255, Length=361, Percent_Identity=27.1468144044321, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI24639764, Length=426, Percent_Identity=23.7089201877934, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI24583789, Length=405, Percent_Identity=25.9259259259259, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI24654215, Length=448, Percent_Identity=24.5535714285714, Blast_Score=109, Evalue=5e-24, Organism=Drosophila melanogaster, GI19922400, Length=432, Percent_Identity=24.7685185185185, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI20130135, Length=411, Percent_Identity=25.5474452554745, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI24655271, Length=411, Percent_Identity=25.3041362530414, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI20130167, Length=424, Percent_Identity=26.6509433962264, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24648416, Length=461, Percent_Identity=24.295010845987, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI21356189, Length=461, Percent_Identity=24.295010845987, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI24584153, Length=399, Percent_Identity=25.5639097744361, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI28573708, Length=432, Percent_Identity=23.1481481481481, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI28573707, Length=432, Percent_Identity=23.1481481481481, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI62484226, Length=407, Percent_Identity=26.044226044226, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24580790, Length=389, Percent_Identity=24.4215938303342, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI28573299, Length=408, Percent_Identity=25, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI20129235, Length=406, Percent_Identity=27.0935960591133, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI24658674, Length=359, Percent_Identity=25.9052924791086, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI221474708, Length=161, Percent_Identity=32.9192546583851, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24658666, Length=408, Percent_Identity=24.2647058823529, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI45550495, Length=357, Percent_Identity=23.8095238095238, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24653727, Length=367, Percent_Identity=23.1607629427793, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24658658, Length=409, Percent_Identity=22.2493887530562, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI45550364, Length=437, Percent_Identity=23.5697940503432, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI281361682, Length=358, Percent_Identity=21.2290502793296, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI24658689, Length=447, Percent_Identity=22.5950782997763, Blast_Score=65, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 49305; Mature: 49174
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLSHAASSAEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYV CCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCCCCCCCHHHH FSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSVFTLLQGFVDIFSGFGIIVALFTL HHHHHHHHHHHCCCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFLVGLAESPSFPGNSRIVAAWFPAQERGTAVAIFNSAQYFATVIFAPIMGWLTHEVGWS HHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCHH HVFFFMGGLGIIISFIWLKVIHEPNNHPGVNKKELEYIAEGGALINMDQKDTKAKVPFSV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCEEE KWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVC CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH GFIGGVLGGIISDWLMRRTGSLNIARKTPIVLGMLLSMVMVFCNYVNVEWMIIGFMALAF HHHHHHHHHHHHHHHHHHCCCCEEHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH FGKGIGALGWAVMADTAPKEISGLSGGLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIY HHCCHHHHHHHHHCCCCCHHHCCCCCHHHHHHCCCHHHHHHHHHHHHEECCCCCCCEEEE VGVHALVAIISYLVLVGDIKRIELKPVAGQLS HHHHHHHHHHHHHHHHCCHHEEEEECCCCCCC >Mature Secondary Structure SSLSHAASSAEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYV CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHCCCCCCCHHHH FSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSVFTLLQGFVDIFSGFGIIVALFTL HHHHHHHHHHHCCCCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RFLVGLAESPSFPGNSRIVAAWFPAQERGTAVAIFNSAQYFATVIFAPIMGWLTHEVGWS HHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCHH HVFFFMGGLGIIISFIWLKVIHEPNNHPGVNKKELEYIAEGGALINMDQKDTKAKVPFSV HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCEEE KWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVC CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH GFIGGVLGGIISDWLMRRTGSLNIARKTPIVLGMLLSMVMVFCNYVNVEWMIIGFMALAF HHHHHHHHHHHHHHHHHHCCCCEEHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH FGKGIGALGWAVMADTAPKEISGLSGGLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIY HHCCHHHHHHHHHCCCCCHHHCCCCCHHHHHHCCCHHHHHHHHHHHHEECCCCCCCEEEE VGVHALVAIISYLVLVGDIKRIELKPVAGQLS HHHHHHHHHHHHHHHHCCHHEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 9772162; 10762278 [H]