| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is invI
Identifier: 16766199
GI number: 16766199
Start: 3036256
End: 3036699
Strand: Reverse
Name: invI
Synonym: STM2893
Alternate gene names: 16766199
Gene position: 3036699-3036256 (Counterclockwise)
Preceding gene: 16766200
Following gene: 16766198
Centisome position: 62.52
GC content: 43.47
Gene sequence:
>444_bases ATGCATTCGCTGACCAGAATTAAAGTATTGCAGCGGCGCTGTACGGTATTTCATTCACAGTGTGAGTCGATATTACTTCG CTATCAGGATGAGGACCGCGGGCTGCAGGCCGAGGAGGAGGCGATCCTTGAACAAATAGCGGGTCTGAAATTGTTATTAG ATACGCTGCGTGCAGAAAACAGACAGCTCAGTCGTGAGGAAATTTATACGTTATTACGTAAGCAGTCTATTGTTCGCCGG CAGATAAAAGATTTAGAACTCCAGATTATACAAATTCAGGAAAAACGGAGCGAGCTGGAAAAGAAAAGGGAAGAGTTTCA GAAAAAAAGTAAATATTGGTTGCGCAAAGAAGGGAACTATCAACGCTGGATAATCCGTCAGAAAAGATTCTATATCCAGC GAGAGATACAGCAGGAAGAGGCCGAGTCAGAGGAGATAATTTAA
Upstream 100 bases:
>100_bases GATAACGATCGGGCGATGCAGATGCGGGATAGCCTGAAAGCCTGGTTATGCCAGCCGGTAGCGCAGTATTCATCCTTTGA TGACACGTTGAGCGGTATGA
Downstream 100 bases:
>100_bases TGGGCGATGTGTCAGCTGTCAGTTCATCCGGGAACATTTTACTGCCGCAGCAGGATGAGGTTGGCGGTTTATCAGAAGCA TTAAAAAAAGCGGTGGAAAA
Product: needle complex assembly protein
Products: NA
Alternate protein names: Invasion protein invI
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MHSLTRIKVLQRRCTVFHSQCESILLRYQDEDRGLQAEEEAILEQIAGLKLLLDTLRAENRQLSREEIYTLLRKQSIVRR QIKDLELQIIQIQEKRSELEKKREEFQKKSKYWLRKEGNYQRWIIRQKRFYIQREIQQEEAESEEII
Sequences:
>Translated_147_residues MHSLTRIKVLQRRCTVFHSQCESILLRYQDEDRGLQAEEEAILEQIAGLKLLLDTLRAENRQLSREEIYTLLRKQSIVRR QIKDLELQIIQIQEKRSELEKKREEFQKKSKYWLRKEGNYQRWIIRQKRFYIQREIQQEEAESEEII >Mature_147_residues MHSLTRIKVLQRRCTVFHSQCESILLRYQDEDRGLQAEEEAILEQIAGLKLLLDTLRAENRQLSREEIYTLLRKQSIVRR QIKDLELQIIQIQEKRSELEKKREEFQKKSKYWLRKEGNYQRWIIRQKRFYIQREIQQEEAESEEII
Specific function: Involved in a secretory pathway responsible for the surface presentation of determinants needed for the entry of Salmonella species into mammalian cells
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the spaM family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SPAM_SALTY (P40612)
Other databases:
- EMBL: U10872 - EMBL: X73525 - EMBL: U43300 - EMBL: AE006468 - PIR: S37305 - RefSeq: NP_461814.1 - GeneID: 1254416 - GenomeReviews: AE006468_GR - KEGG: stm:STM2893 - HOGENOM: HBG671454 - OMA: CEASLQK - ProtClustDB: PRK15335 - BioCyc: STYP99287:STM2893-MONOMER - GO: GO:0009405 - InterPro: IPR002954 - PRINTS: PR01227
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18089; Mature: 18089
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSLTRIKVLQRRCTVFHSQCESILLRYQDEDRGLQAEEEAILEQIAGLKLLLDTLRAEN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RQLSREEIYTLLRKQSIVRRQIKDLELQIIQIQEKRSELEKKREEFQKKSKYWLRKEGNY HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH QRWIIRQKRFYIQREIQQEEAESEEII HHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MHSLTRIKVLQRRCTVFHSQCESILLRYQDEDRGLQAEEEAILEQIAGLKLLLDTLRAEN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RQLSREEIYTLLRKQSIVRRQIKDLELQIIQIQEKRSELEKKREEFQKKSKYWLRKEGNY HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH QRWIIRQKRFYIQREIQQEEAESEEII HHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8404849; 7752894; 11677609