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The map label for this gene is ygaC [H]

Identifier: 16766112

GI number: 16766112

Start: 2948809

End: 2949159

Strand: Reverse

Name: ygaC [H]

Synonym: STM2801

Alternate gene names: 16766112

Gene position: 2949159-2948809 (Counterclockwise)

Preceding gene: 16766114

Following gene: 16766110

Centisome position: 60.71

GC content: 49.86

Gene sequence:

>351_bases
ATGTATTTACGACCTGACGAGGTGGCGCGGGTACTGGAAAAGGCAGGGTTTACCGTCGATGTGGTGACGAATAAGACGTA
TGGTTATCGACGCGGCGAGAATTATGTTTATGTTAACCGCGAGGCGCGTATGGGGCGTACCGCGCTGATCATTCACCCCA
GATTAAAAGACCGTAGCTCATCACTGGCTGACCCGGCTTCGGATATTAAAACCTGCGATCATTACCAAAACTTTCCGCTC
TATTTAGGCGGCGAGACCCACGAACATTACGGTATTCCCCACGGCTTTAGCTCCCGAATAGCGTTAGAACGTTATCTGAA
TGGGCTTTTTGGCGACGAAAAAACCGACTAA

Upstream 100 bases:

>100_bases
TTGTTACGGCGATATCATGCGTTTCTGGACTTTTCTGAAAGCGTTGATAACGCGCTATCGGGTAAGGTAAGCCCGCAGTA
CAAGAGAATGAGGATAAAAT

Downstream 100 bases:

>100_bases
AAGCGCGACTGGCAATGCCAGTCGCGACGCTAACTTACGCCTTAGCCTGATGATAGCTGCTCACTTTAAACAGGCGGCGA
CAATAATCCAGGAAGTAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MYLRPDEVARVLEKAGFTVDVVTNKTYGYRRGENYVYVNREARMGRTALIIHPRLKDRSSSLADPASDIKTCDHYQNFPL
YLGGETHEHYGIPHGFSSRIALERYLNGLFGDEKTD

Sequences:

>Translated_116_residues
MYLRPDEVARVLEKAGFTVDVVTNKTYGYRRGENYVYVNREARMGRTALIIHPRLKDRSSSLADPASDIKTCDHYQNFPL
YLGGETHEHYGIPHGFSSRIALERYLNGLFGDEKTD
>Mature_116_residues
MYLRPDEVARVLEKAGFTVDVVTNKTYGYRRGENYVYVNREARMGRTALIIHPRLKDRSSSLADPASDIKTCDHYQNFPL
YLGGETHEHYGIPHGFSSRIALERYLNGLFGDEKTD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789026, Length=112, Percent_Identity=88.3928571428571, Blast_Score=214, Evalue=1e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018994 [H]

Pfam domain/function: PF09400 DUF2002 [H]

EC number: NA

Molecular weight: Translated: 13313; Mature: 13313

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLRPDEVARVLEKAGFTVDVVTNKTYGYRRGENYVYVNREARMGRTALIIHPRLKDRSS
CCCCHHHHHHHHHHCCCEEEEEECCCCCEECCCCEEEECCCCCCCCEEEEEECCCCCCCC
SLADPASDIKTCDHYQNFPLYLGGETHEHYGIPHGFSSRIALERYLNGLFGDEKTD
CCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MYLRPDEVARVLEKAGFTVDVVTNKTYGYRRGENYVYVNREARMGRTALIIHPRLKDRSS
CCCCHHHHHHHHHHCCCEEEEEECCCCCEECCCCEEEECCCCCCCCEEEEEECCCCCCCC
SLADPASDIKTCDHYQNFPLYLGGETHEHYGIPHGFSSRIALERYLNGLFGDEKTD
CCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]