Click here to switch to the map view.

The map label for this gene is 16766033

Identifier: 16766033

GI number: 16766033

Start: 2861960

End: 2863042

Strand: Reverse

Name: 16766033

Synonym: STM2720

Alternate gene names: NA

Gene position: 2863042-2861960 (Counterclockwise)

Preceding gene: 16766034

Following gene: 16766032

Centisome position: 58.94

GC content: 54.11

Gene sequence:

>1083_bases
ATGAAAAAGAAAACCCGCTTTGCCTTTAACGCTTACCTGCAGCAGTTGGCGCGCCTGAACAGTGTGGAGGTTGAAGAACT
CTCCAGCAAGTTTACCGTGGAGCCGTCCGTGCAGCAGACGCTGGAAGACCAGATCCAGCAGTCCGCCGCTTTCCTGACGC
TGATTAACATCACGCCGGTCACTGAACAGTCAGGACAGTTGCTGGGGCTGGGCGTTGGCAGCACCATTGCCGGAACCACC
GATACCACCACCAAAGAGCGCGAGCCTACCGATCCGACGCTGATGGAAGACGTGGAATACAAATGCGAACAGACCAACTT
TGATACGGTGCTGACCTACGCAAAACTGGACCTGTGGGCCAAGTTCCAGGACTTCCAGGTGCGTATCCGCAACGCCATCG
TCAAGCGTCAGGCGCTGGACCGCATCATGATCGGCTTTAACGGCGTGAAGCGCGCCAAAACCTCAAATCGTGCTGAAAAC
CCGCTGCTGCAGGACGTCAATAAAGGCTGGTTACAGAAAATCCGCGAAGACGCGCCGGATCATGTTATGGGCAGTAAAAC
CGCAGAAGACGGCACCACTACTGCGGAGCCGGTAAAAGTAGGTCCGGGTGGTAAGTATGTAAACCTTGACGCTGTGGTGA
TGGATGCCGTCAACGAGCTGATCGATGTGGAGTATCAGGATGATGATGAGCTGGTTGTTGTCTGTGGTCGTGAACTGCTG
TCTGACAAGTATTTCCCGCTGGTCAACAAAGAGCAGGACAACAGCGAAAAAATTGCCGCCGATATGATCATCAGCCAGAA
ACGTATGGGCGGCCTGCAGGCTGTGCGTGCGCCTTTCTTCCCGGCAAATGCATTGTTAATCACCCGACTGGATAACCTGT
CCATCTACTGGCAGGAAGACACCCGCCGCCGTTCTGTTATCGACAACCCGAAACGTGACCGGATTGAAAACTTTGAATCC
GTTAACGAGGCGTATGTGGTCGAGGACTACCGCTGCGCGGCACTGGTGGAAAACATCGAAATGAGTGATTTCACTCCGCC
TGCCGCACCTGTTGTAGCCGCAGAGTCAGGAAATGGAGAGTAA

Upstream 100 bases:

>100_bases
CTTAGCAGCGAAGACAGCCGTAAAGACTACCGCCAGCGCGCGCCGGGCGGTGACGCACCGGCAGGCACCCTGACCAATTG
CTGATGGAGCATAAAACCCG

Downstream 100 bases:

>100_bases
CGCATGAGCCTGAGTCCCGCACGGCAGCACCGCCTGCGCATTCAGGCCGAACAGGCCGCCCGTGAGGGCGGCAGTGTTCG
CCGCCATGCGTCTGGCTATG

Product: major capsid-like protein

Products: NA

Alternate protein names: Capsid Protein; Phage Capsid Protein P2 Family; Phage Capsid Protein; Capsid Proteins; Phage Capsid Protein; Capsid; Phage Gene; Phage-Related Capsid Completion Protein; Bacteriophage Capsid Protein; Gp2 Phage Capsid Protein P2 Family Protein; Phage-Related Capsid Protein; Phage Protein; Bacteriophage Capsid Protein N; Capsid-Like Protein; Capsid Protein Phage Origin; Prophage; Phage P2 Capsid GpN-Like Protein; Phage Capsid Protein N; Minor Capsid / Capsid Protein N*; Phage Capsid-Like Protein; Phage-Related Capsid Protein; Prophage Capsid Protein; Bacteriophage Protein; Phage Capsid Family

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKKKTRFAFNAYLQQLARLNSVEVEELSSKFTVEPSVQQTLEDQIQQSAAFLTLINITPVTEQSGQLLGLGVGSTIAGTT
DTTTKEREPTDPTLMEDVEYKCEQTNFDTVLTYAKLDLWAKFQDFQVRIRNAIVKRQALDRIMIGFNGVKRAKTSNRAEN
PLLQDVNKGWLQKIREDAPDHVMGSKTAEDGTTTAEPVKVGPGGKYVNLDAVVMDAVNELIDVEYQDDDELVVVCGRELL
SDKYFPLVNKEQDNSEKIAADMIISQKRMGGLQAVRAPFFPANALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFES
VNEAYVVEDYRCAALVENIEMSDFTPPAAPVVAAESGNGE

Sequences:

>Translated_360_residues
MKKKTRFAFNAYLQQLARLNSVEVEELSSKFTVEPSVQQTLEDQIQQSAAFLTLINITPVTEQSGQLLGLGVGSTIAGTT
DTTTKEREPTDPTLMEDVEYKCEQTNFDTVLTYAKLDLWAKFQDFQVRIRNAIVKRQALDRIMIGFNGVKRAKTSNRAEN
PLLQDVNKGWLQKIREDAPDHVMGSKTAEDGTTTAEPVKVGPGGKYVNLDAVVMDAVNELIDVEYQDDDELVVVCGRELL
SDKYFPLVNKEQDNSEKIAADMIISQKRMGGLQAVRAPFFPANALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFES
VNEAYVVEDYRCAALVENIEMSDFTPPAAPVVAAESGNGE
>Mature_360_residues
MKKKTRFAFNAYLQQLARLNSVEVEELSSKFTVEPSVQQTLEDQIQQSAAFLTLINITPVTEQSGQLLGLGVGSTIAGTT
DTTTKEREPTDPTLMEDVEYKCEQTNFDTVLTYAKLDLWAKFQDFQVRIRNAIVKRQALDRIMIGFNGVKRAKTSNRAEN
PLLQDVNKGWLQKIREDAPDHVMGSKTAEDGTTTAEPVKVGPGGKYVNLDAVVMDAVNELIDVEYQDDDELVVVCGRELL
SDKYFPLVNKEQDNSEKIAADMIISQKRMGGLQAVRAPFFPANALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFES
VNEAYVVEDYRCAALVENIEMSDFTPPAAPVVAAESGNGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40324; Mature: 40324

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKTRFAFNAYLQQLARLNSVEVEELSSKFTVEPSVQQTLEDQIQQSAAFLTLINITPV
CCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCEECHHHHHHHHHHHHHHHHEEEEEEECCC
TEQSGQLLGLGVGSTIAGTTDTTTKEREPTDPTLMEDVEYKCEQTNFDTVLTYAKLDLWA
CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KFQDFQVRIRNAIVKRQALDRIMIGFNGVKRAKTSNRAENPLLQDVNKGWLQKIREDAPD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
HVMGSKTAEDGTTTAEPVKVGPGGKYVNLDAVVMDAVNELIDVEYQDDDELVVVCGRELL
CCCCCCCCCCCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHCCEECCCCCEEEEECHHHH
SDKYFPLVNKEQDNSEKIAADMIISQKRMGGLQAVRAPFFPANALLITRLDNLSIYWQED
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEECCCEEEECCC
TRRRSVIDNPKRDRIENFESVNEAYVVEDYRCAALVENIEMSDFTPPAAPVVAAESGNGE
CHHHHHCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCC
>Mature Secondary Structure
MKKKTRFAFNAYLQQLARLNSVEVEELSSKFTVEPSVQQTLEDQIQQSAAFLTLINITPV
CCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCEECHHHHHHHHHHHHHHHHEEEEEEECCC
TEQSGQLLGLGVGSTIAGTTDTTTKEREPTDPTLMEDVEYKCEQTNFDTVLTYAKLDLWA
CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KFQDFQVRIRNAIVKRQALDRIMIGFNGVKRAKTSNRAENPLLQDVNKGWLQKIREDAPD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
HVMGSKTAEDGTTTAEPVKVGPGGKYVNLDAVVMDAVNELIDVEYQDDDELVVVCGRELL
CCCCCCCCCCCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHCCEECCCCCEEEEECHHHH
SDKYFPLVNKEQDNSEKIAADMIISQKRMGGLQAVRAPFFPANALLITRLDNLSIYWQED
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEECCCEEEECCC
TRRRSVIDNPKRDRIENFESVNEAYVVEDYRCAALVENIEMSDFTPPAAPVVAAESGNGE
CHHHHHCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA