| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
Click here to switch to the map view.
The map label for this gene is 16766023
Identifier: 16766023
GI number: 16766023
Start: 2857415
End: 2857993
Strand: Reverse
Name: 16766023
Synonym: STM2710
Alternate gene names: NA
Gene position: 2857993-2857415 (Counterclockwise)
Preceding gene: 16766024
Following gene: 16766022
Centisome position: 58.84
GC content: 58.38
Gene sequence:
>579_bases ATGAATGCACAACTGACCGAAATTATGCGCCTTATCACCAACCTGATCCGCACCGGCACCGTGACCGAAGTGGACCGGGA AAACTGGCTGTGCCGGGTGAGAGTGGGCGAGCTTGAAACCAACTGGATTAACTGGCTGACGCTGCGTGCCGGTGGTGCCC GTACATGGTGGTGCCCGTCGCCGGATGAGCAGGTGGTGGTACTGAGCATGGGCGGCAATCTGGAAACTGCTTTTGCGTTG CCTGCCATCTACTCCAATCAGTTTGCGCCGCCGTCGGATTCTGTGGACGGCTGCGTGACGGAGTACCCGGACGGTGGATG GTTTGAGTACGAACCCGCCACCGGGCGGTGGCATGTCCGGGGTATCAAATCCATGGTGATCGAGGCGGCGGACAATATCA CCCTAAAAACCGGTGAGTTTGTAGTGGAGGCTGACACAACACGCATTAACAGCGAGGTGGTGATCAACGGCGGCGTTACC CAGGGCGGCGGCGCAATGAGTTCTAACGGGGTCGTGATGGATAAACACGGTCACACTGGCGTTAAGTCAGGCGGGGATAC ATCGGGAGGTCCGGTATGA
Upstream 100 bases:
>100_bases GCGACACCCTGCTGCGCTGGCTGGCGGGGTGATCTTTGTGCCACTGCTGGCACAAGCGCCCGCGCTGCCTACCTTTTCCC TCTGATGGCAACCTTTCGTT
Downstream 100 bases:
>100_bases CGCTGTATATCGGTATGAGCCGGAATGACGGGCAGGCCCTTGCGGATACAGACCATCTGCGCCAGTCGGTGCGGGATATT CTGCTGACACCGCAGGGTAG
Product: phage baseplate assembly-like protein
Products: NA
Alternate protein names: Baseplate Assembly Protein V; Phage Baseplate Assembly Protein; Phage-Related Baseplate Protein; Baseplate Assembly Protein GpV; Phage-Related Baseplate Assembly Protein; Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein V; Phage P2 Baseplate Assembly GpV-Like Protein; Phage P2-Like Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV Protein; Bacteriophage Baseplate Protein; Bacteriophage Baseplate Assembly Protein V; Phage Tail Spike Protein; Phage Baseplate Assembly; Phage Baseplate Assembly-Like Protein; Phage Baseplate Component; Bacteriophage P2 Baseplate Assembly Protein GPV; Prophage LambdaW5 Baseplate Assembly Protein V; Phage Baseplate Protein; Baseplate Assembly Protein V Prophage; Prophage Baseplate Assembly Protein
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MNAQLTEIMRLITNLIRTGTVTEVDRENWLCRVRVGELETNWINWLTLRAGGARTWWCPSPDEQVVVLSMGGNLETAFAL PAIYSNQFAPPSDSVDGCVTEYPDGGWFEYEPATGRWHVRGIKSMVIEAADNITLKTGEFVVEADTTRINSEVVINGGVT QGGGAMSSNGVVMDKHGHTGVKSGGDTSGGPV
Sequences:
>Translated_192_residues MNAQLTEIMRLITNLIRTGTVTEVDRENWLCRVRVGELETNWINWLTLRAGGARTWWCPSPDEQVVVLSMGGNLETAFAL PAIYSNQFAPPSDSVDGCVTEYPDGGWFEYEPATGRWHVRGIKSMVIEAADNITLKTGEFVVEADTTRINSEVVINGGVT QGGGAMSSNGVVMDKHGHTGVKSGGDTSGGPV >Mature_192_residues MNAQLTEIMRLITNLIRTGTVTEVDRENWLCRVRVGELETNWINWLTLRAGGARTWWCPSPDEQVVVLSMGGNLETAFAL PAIYSNQFAPPSDSVDGCVTEYPDGGWFEYEPATGRWHVRGIKSMVIEAADNITLKTGEFVVEADTTRINSEVVINGGVT QGGGAMSSNGVVMDKHGHTGVKSGGDTSGGPV
Specific function: Unknown
COG id: COG4540
COG function: function code R; Phage P2 baseplate assembly protein gpV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20729; Mature: 20729
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAQLTEIMRLITNLIRTGTVTEVDRENWLCRVRVGELETNWINWLTLRAGGARTWWCPS CCCHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCEECCEEEEEEEECCCCEEECCCC PDEQVVVLSMGGNLETAFALPAIYSNQFAPPSDSVDGCVTEYPDGGWFEYEPATGRWHVR CCCCEEEEEECCCCCEEEECCHHHCCCCCCCCCCCCCCEEECCCCCEEEECCCCCEEEEH GIKSMVIEAADNITLKTGEFVVEADTTRINSEVVINGGVTQGGGAMSSNGVVMDKHGHTG HHHHHHHHHCCCEEEECCCEEEEECCEECCCEEEEECCCCCCCCCCCCCCEEEECCCCCC VKSGGDTSGGPV CCCCCCCCCCCC >Mature Secondary Structure MNAQLTEIMRLITNLIRTGTVTEVDRENWLCRVRVGELETNWINWLTLRAGGARTWWCPS CCCHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCEECCEEEEEEEECCCCEEECCCC PDEQVVVLSMGGNLETAFALPAIYSNQFAPPSDSVDGCVTEYPDGGWFEYEPATGRWHVR CCCCEEEEEECCCCCEEEECCHHHCCCCCCCCCCCCCCEEECCCCCEEEECCCCCEEEEH GIKSMVIEAADNITLKTGEFVVEADTTRINSEVVINGGVTQGGGAMSSNGVVMDKHGHTG HHHHHHHHHCCCEEEECCCEEEEECCEECCCEEEEECCCCCCCCCCCCCCEEEECCCCCC VKSGGDTSGGPV CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA