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The map label for this gene is abrB [H]

Identifier: 16764099

GI number: 16764099

Start: 794771

End: 795817

Strand: Reverse

Name: abrB [H]

Synonym: STM0729

Alternate gene names: 16764099

Gene position: 795817-794771 (Counterclockwise)

Preceding gene: 16764100

Following gene: 16764080

Centisome position: 16.38

GC content: 56.16

Gene sequence:

>1047_bases
ATGCCGATTCTGCAGTGGTTTTTGTTGTTCCTGTTATCGCTGCTCATTTCCCTTATTTTTCTCTATCTGCACCTTCCGGC
GGCAATGCTGCTCGGTCCAATGATTGCGGGTATCGTGTTGAGTTTGCGAGGTAGTACGCTACAACTTCCGCGCGGTATTT
TTCTCGCCGCGCAGGCAATTCTCGGCTGTATGATCGCCCAAAATCTAACCGGTTCGATATTGACCACCCTCGCCCTCTAC
TGGCCGGTCGTGCTTTTAGTGTTGCTGGTGACGCTGCTTTCCAGCGCGGTAGTCGGCTGGCTGCTGGTACGTTACAGCTC
ACTGCCCGGCAACACCGGCGCATGGGGGTCTTCGCCGGGCGGCGCGGCGGCAATGGTAGCGATGGCGCAAGATTACGGGG
CGGATATCCGCCTGGTGGCGTTTATGCAGTATCTACGGGTACTGTTTGTGGCTGGCGCGGCGGTGCTGGTGACACGCCTG
ATACTCGGCGACAGCGCGGCAGCGGTCAGCCAACAGGTGATCTGGTTTCCGCCGCTTAGCGGTAATGTATTGACGACGCT
GTTATTAGCGATCGTGGCGGGCATTGCCGGTCGCCTGATGCGTATCCCTTCCGGCACGATGCTGCTCCCCATGTTGGCAG
GCGCGCTTCTCCATTCGCAAGGCATCATTGAGATTGAATTACCCGAATGGCTGCTGGCCGTGGCGTATATGGCGATAGGC
TGGCGTATTGGGCTGGGTTTTGACAGACAGGTGTTTTTTATGGCGCTGCGGCCATTGCCGCAAATCTTATTGTCAATTTT
CGCGCTGATGGCGATTTGCGCCGCGATGGCGTGGGGAATGGCTTACTACATGCAGATTGATTTTATGACGGCTTATCTTG
CCACCAGTCCCGGTGGTCTGGATACGGTTGCCGCGATCGCGGCAGGAAGCAGTGCCGATATGGCGCTCATCATGGCAATG
CAAACCCTACGGCTGTTCAGCATTCTGTTAACTGGGCCAGCAGTGGCCCGTTTTATATCAACCTATGCGCCCAAACAACC
TTTGTAG

Upstream 100 bases:

>100_bases
GTACATTTTCCCTTTTTTCTTATCCTCATTATTTTATTCTTACCCCGTTACTCTCTATGATTAATTAAGGTTTCGCTAAA
TATCATTCAGGGAGCATGGA

Downstream 100 bases:

>100_bases
GGCTGATAAGCGTCGCGCCATCAGGCAATAGCCGCTCGCCGATGTCGGTTCCGGCTATTTCTGGCAATGCGGGCACCAGT
AAAACGGGCGTGAGGACAGT

Product: transport protein

Products: NA

Alternate protein names: AidB regulator [H]

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MPILQWFLLFLLSLLISLIFLYLHLPAAMLLGPMIAGIVLSLRGSTLQLPRGIFLAAQAILGCMIAQNLTGSILTTLALY
WPVVLLVLLVTLLSSAVVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRL
ILGDSAAAVSQQVIWFPPLSGNVLTTLLLAIVAGIAGRLMRIPSGTMLLPMLAGALLHSQGIIEIELPEWLLAVAYMAIG
WRIGLGFDRQVFFMALRPLPQILLSIFALMAICAAMAWGMAYYMQIDFMTAYLATSPGGLDTVAAIAAGSSADMALIMAM
QTLRLFSILLTGPAVARFISTYAPKQPL

Sequences:

>Translated_348_residues
MPILQWFLLFLLSLLISLIFLYLHLPAAMLLGPMIAGIVLSLRGSTLQLPRGIFLAAQAILGCMIAQNLTGSILTTLALY
WPVVLLVLLVTLLSSAVVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRL
ILGDSAAAVSQQVIWFPPLSGNVLTTLLLAIVAGIAGRLMRIPSGTMLLPMLAGALLHSQGIIEIELPEWLLAVAYMAIG
WRIGLGFDRQVFFMALRPLPQILLSIFALMAICAAMAWGMAYYMQIDFMTAYLATSPGGLDTVAAIAAGSSADMALIMAM
QTLRLFSILLTGPAVARFISTYAPKQPL
>Mature_347_residues
PILQWFLLFLLSLLISLIFLYLHLPAAMLLGPMIAGIVLSLRGSTLQLPRGIFLAAQAILGCMIAQNLTGSILTTLALYW
PVVLLVLLVTLLSSAVVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRLI
LGDSAAAVSQQVIWFPPLSGNVLTTLLLAIVAGIAGRLMRIPSGTMLLPMLAGALLHSQGIIEIELPEWLLAVAYMAIGW
RIGLGFDRQVFFMALRPLPQILLSIFALMAICAAMAWGMAYYMQIDFMTAYLATSPGGLDTVAAIAAGSSADMALIMAMQ
TLRLFSILLTGPAVARFISTYAPKQPL

Specific function: Seems to be involved in the regulation of AidB [H]

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AbrB family [H]

Homologues:

Organism=Escherichia coli, GI87081776, Length=346, Percent_Identity=80.9248554913295, Blast_Score=533, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017516
- InterPro:   IPR007820 [H]

Pfam domain/function: PF05145 AmoA [H]

EC number: NA

Molecular weight: Translated: 37101; Mature: 36969

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00099 THIOLASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPILQWFLLFLLSLLISLIFLYLHLPAAMLLGPMIAGIVLSLRGSTLQLPRGIFLAAQAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LGCMIAQNLTGSILTTLALYWPVVLLVLLVTLLSSAVVGWLLVRYSSLPGNTGAWGSSPG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRLILGDSAAAVSQQVIWFPPLS
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCC
GNVLTTLLLAIVAGIAGRLMRIPSGTMLLPMLAGALLHSQGIIEIELPEWLLAVAYMAIG
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHH
WRIGLGFDRQVFFMALRPLPQILLSIFALMAICAAMAWGMAYYMQIDFMTAYLATSPGGL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DTVAAIAAGSSADMALIMAMQTLRLFSILLTGPAVARFISTYAPKQPL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PILQWFLLFLLSLLISLIFLYLHLPAAMLLGPMIAGIVLSLRGSTLQLPRGIFLAAQAI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LGCMIAQNLTGSILTTLALYWPVVLLVLLVTLLSSAVVGWLLVRYSSLPGNTGAWGSSPG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GAAAMVAMAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRLILGDSAAAVSQQVIWFPPLS
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCC
GNVLTTLLLAIVAGIAGRLMRIPSGTMLLPMLAGALLHSQGIIEIELPEWLLAVAYMAIG
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHH
WRIGLGFDRQVFFMALRPLPQILLSIFALMAICAAMAWGMAYYMQIDFMTAYLATSPGGL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DTVAAIAAGSSADMALIMAMQTLRLFSILLTGPAVARFISTYAPKQPL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8002588 [H]