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The map label for this gene is ybeR [H]

Identifier: 16764032

GI number: 16764032

Start: 718198

End: 718905

Strand: Direct

Name: ybeR [H]

Synonym: STM0655

Alternate gene names: 16764032

Gene position: 718198-718905 (Clockwise)

Preceding gene: 16764030

Following gene: 16764033

Centisome position: 14.79

GC content: 52.97

Gene sequence:

>708_bases
ATGGATAAAGAATCACAATATTTACTCTTTGCACTTTCCTCGCCGATGGAAGTATTGAACGAGGACTGTTTACCTTCACA
TTCGTCACCGAAAATGTATTTAGGTGTAAAACGTTTCGATCTTGAATCGTCGTGGGGTATTGAAAATCGCGATGAACTGC
TTCAGACCATTTCCCGCAGGACGGATGACGGTCATGCCACACAACTGGAATGGCTATATCGCCGCTGGTTTAGGTATGCG
CCGCAGGAGTGGCAGGAGTATACCGACGCGCTGGACGAGGGAGATCGCATTTATGCCCGATTCGTCGCTGATACCGCCGT
GTGTTGCGGCGAAGGTGGTATTCGCAGTTGGGATTATGTGCGGATGGGATTTCTCTGCCGCATGGGCGTGCTCAATGAAT
GGCTGACGGAAGAGGAGAGCCTGTGGCTGCAGTCGCGGATACAGCTTCGCGCGCTCAGCTATTATTCCGGCTGGTTGCCG
TACTTCAGCGCTTATTACACCGGGCGTTTGTACTGGCAGTTACGGAATGGCGATAACCTACCGCTGCTACGCGAGACATT
CGCCCGTAAGGAGTTTGATGACGCGGGGCGACGTATGATGAATAAACTGATCGCCGGGAAGGACAGTTTTTACGCCACGC
TGCCGTGGCGCTACCTGCCCCATTACCCTGAATGCCCGGACACGCTTCAGGAGGTGAGCGATCTATGA

Upstream 100 bases:

>100_bases
TTTTAGATTAATAATATATTGCGATTTGGCTTTGTTGTACTCTATTTTAGTTTTCAATTGCGTTTTTATTTGTGGTGTGA
ATATATTTTGGCGATTTATT

Downstream 100 bases:

>100_bases
AAACCTGTTGGCAAGTCCTTGGCATTGAGGCCACCACGGATACCGACGCCATTCGTCAGGCTTATCTGGCGCTGCTGCCG
TCATTTCATCCGGAAACCGA

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MDKESQYLLFALSSPMEVLNEDCLPSHSSPKMYLGVKRFDLESSWGIENRDELLQTISRRTDDGHATQLEWLYRRWFRYA
PQEWQEYTDALDEGDRIYARFVADTAVCCGEGGIRSWDYVRMGFLCRMGVLNEWLTEEESLWLQSRIQLRALSYYSGWLP
YFSAYYTGRLYWQLRNGDNLPLLRETFARKEFDDAGRRMMNKLIAGKDSFYATLPWRYLPHYPECPDTLQEVSDL

Sequences:

>Translated_235_residues
MDKESQYLLFALSSPMEVLNEDCLPSHSSPKMYLGVKRFDLESSWGIENRDELLQTISRRTDDGHATQLEWLYRRWFRYA
PQEWQEYTDALDEGDRIYARFVADTAVCCGEGGIRSWDYVRMGFLCRMGVLNEWLTEEESLWLQSRIQLRALSYYSGWLP
YFSAYYTGRLYWQLRNGDNLPLLRETFARKEFDDAGRRMMNKLIAGKDSFYATLPWRYLPHYPECPDTLQEVSDL
>Mature_235_residues
MDKESQYLLFALSSPMEVLNEDCLPSHSSPKMYLGVKRFDLESSWGIENRDELLQTISRRTDDGHATQLEWLYRRWFRYA
PQEWQEYTDALDEGDRIYARFVADTAVCCGEGGIRSWDYVRMGFLCRMGVLNEWLTEEESLWLQSRIQLRALSYYSGWLP
YFSAYYTGRLYWQLRNGDNLPLLRETFARKEFDDAGRRMMNKLIAGKDSFYATLPWRYLPHYPECPDTLQEVSDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeU [H]

Homologues:

Organism=Escherichia coli, GI1786865, Length=235, Percent_Identity=62.9787234042553, Blast_Score=308, Evalue=2e-85,
Organism=Escherichia coli, GI1786868, Length=235, Percent_Identity=60, Blast_Score=296, Evalue=7e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009677 [H]

Pfam domain/function: PF06889 DUF1266 [H]

EC number: NA

Molecular weight: Translated: 27911; Mature: 27911

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKESQYLLFALSSPMEVLNEDCLPSHSSPKMYLGVKRFDLESSWGIENRDELLQTISRR
CCCCCCEEEEEECCCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHC
TDDGHATQLEWLYRRWFRYAPQEWQEYTDALDEGDRIYARFVADTAVCCGEGGIRSWDYV
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHH
RMGFLCRMGVLNEWLTEEESLWLQSRIQLRALSYYSGWLPYFSAYYTGRLYWQLRNGDNL
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
PLLRETFARKEFDDAGRRMMNKLIAGKDSFYATLPWRYLPHYPECPDTLQEVSDL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MDKESQYLLFALSSPMEVLNEDCLPSHSSPKMYLGVKRFDLESSWGIENRDELLQTISRR
CCCCCCEEEEEECCCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHC
TDDGHATQLEWLYRRWFRYAPQEWQEYTDALDEGDRIYARFVADTAVCCGEGGIRSWDYV
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHH
RMGFLCRMGVLNEWLTEEESLWLQSRIQLRALSYYSGWLPYFSAYYTGRLYWQLRNGDNL
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
PLLRETFARKEFDDAGRRMMNKLIAGKDSFYATLPWRYLPHYPECPDTLQEVSDL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]