Click here to switch to the map view.

The map label for this gene is ybeQ [H]

Identifier: 16764031

GI number: 16764031

Start: 717078

End: 718073

Strand: Reverse

Name: ybeQ [H]

Synonym: STM0654

Alternate gene names: 16764031

Gene position: 718073-717078 (Counterclockwise)

Preceding gene: 16764036

Following gene: 16764025

Centisome position: 14.78

GC content: 47.49

Gene sequence:

>996_bases
ATGAATCATTCCATAACCAGTCATCCCTGCGACAACGTATCTTTAGCACAATTAACCGAACTGGCGCAGTCAGGAAATAG
TGAAGCTCAATATATATTAGGCCGTTTATATAATGACGAACGTATAGATGGCAGCGAAGAGGATAAGCTCTCTTTTTATT
GGTTGCAGCAGGCAGCTGAACAAGGACACTGCGAGGCACAATATTGGCTCGGCTTACGATACAAAGACACGCCTACCGAC
ATGAAAGATAATACGCTGGCTTTATTCTGGTCAGAAAAAGCCGCACAGCAAGGACACCGCCACGCTTTCAACACATTAGG
CTGGGTTCAGGAAGGAGAAACCGGGATGGCGCCAGATTATGCCCAGGCCGTTGCCTGGTATCGCAAAGGAGCAGAACAGA
GCCACAACCTTGCGCAATATAATCTCGGGAGAATGTATCATTCAGGAACTGGCGTAGAGCAAAATGATACACAGGCACTC
TACTGGTTTAAACAGGCAGCATTACAAGGCCATTGCGCCAGCCAGGAAAGACTGGCGTATATGTATGGCAATGGGAAAGG
ATGTCGGAAAAATTTATCCCTTGCCGCCCTTTGGTACAAGAAGAGCGCGCTACAAGAGAGCAGCTACTCGCAATATCAGA
TGGGCTATTGTTATTACATCGGAAAAGGTATCAAACAAGATTACCAGCAGGCAATATACTGGTTTCGAAAAGCGGCAGAC
CAGGGTGACGATGATGCCTATAACAGTATCGGCTGGATGTACAAATGCGGTCATGGCGTCGAGCAAAATTATTCGCTAGC
ACTGGAATGGTTCCACAAATCAGCAGAATGTAACAATTCATCGGGCTGGTACAACCTCGGATGCATGTACAGAGATGGAC
ACGGTACCGCACAAGACCTACAACAAGCGCTCTACTGGTTCAAAAAAGCACAGCCCACGGGCAAATGGAACGTCGATGAA
GAGATCCGCAAACTGGAAGCCCAACTGCACGCTTAA

Upstream 100 bases:

>100_bases
ACCACAAATAAAAACGCAATTGAAAACTAAAATAGAGTACAACAAAGCCAAATCGCAATATATTATTAATCTAAAAAACA
ATGGCGGGATAAATTAAAAA

Downstream 100 bases:

>100_bases
CATGGCGGACGGCAACCGTCCGCTCACGATAATGAACCTTACGGCTCAAACGGCCTGCGCTGGAACTGATCGTGGCCACA
CTTCGGGCAGAGCGGCAACA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MNHSITSHPCDNVSLAQLTELAQSGNSEAQYILGRLYNDERIDGSEEDKLSFYWLQQAAEQGHCEAQYWLGLRYKDTPTD
MKDNTLALFWSEKAAQQGHRHAFNTLGWVQEGETGMAPDYAQAVAWYRKGAEQSHNLAQYNLGRMYHSGTGVEQNDTQAL
YWFKQAALQGHCASQERLAYMYGNGKGCRKNLSLAALWYKKSALQESSYSQYQMGYCYYIGKGIKQDYQQAIYWFRKAAD
QGDDDAYNSIGWMYKCGHGVEQNYSLALEWFHKSAECNNSSGWYNLGCMYRDGHGTAQDLQQALYWFKKAQPTGKWNVDE
EIRKLEAQLHA

Sequences:

>Translated_331_residues
MNHSITSHPCDNVSLAQLTELAQSGNSEAQYILGRLYNDERIDGSEEDKLSFYWLQQAAEQGHCEAQYWLGLRYKDTPTD
MKDNTLALFWSEKAAQQGHRHAFNTLGWVQEGETGMAPDYAQAVAWYRKGAEQSHNLAQYNLGRMYHSGTGVEQNDTQAL
YWFKQAALQGHCASQERLAYMYGNGKGCRKNLSLAALWYKKSALQESSYSQYQMGYCYYIGKGIKQDYQQAIYWFRKAAD
QGDDDAYNSIGWMYKCGHGVEQNYSLALEWFHKSAECNNSSGWYNLGCMYRDGHGTAQDLQQALYWFKKAQPTGKWNVDE
EIRKLEAQLHA
>Mature_331_residues
MNHSITSHPCDNVSLAQLTELAQSGNSEAQYILGRLYNDERIDGSEEDKLSFYWLQQAAEQGHCEAQYWLGLRYKDTPTD
MKDNTLALFWSEKAAQQGHRHAFNTLGWVQEGETGMAPDYAQAVAWYRKGAEQSHNLAQYNLGRMYHSGTGVEQNDTQAL
YWFKQAALQGHCASQERLAYMYGNGKGCRKNLSLAALWYKKSALQESSYSQYQMGYCYYIGKGIKQDYQQAIYWFRKAAD
QGDDDAYNSIGWMYKCGHGVEQNYSLALEWFHKSAECNNSSGWYNLGCMYRDGHGTAQDLQQALYWFKKAQPTGKWNVDE
EIRKLEAQLHA

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=196, Percent_Identity=32.1428571428571, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI151301150, Length=324, Percent_Identity=26.8518518518519, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI154689719, Length=295, Percent_Identity=26.1016949152542, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI217330658, Length=260, Percent_Identity=24.2307692307692, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI217330656, Length=260, Percent_Identity=24.2307692307692, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI87081769, Length=325, Percent_Identity=49.5384615384615, Blast_Score=311, Evalue=4e-86,
Organism=Escherichia coli, GI1786867, Length=123, Percent_Identity=38.2113821138211, Blast_Score=73, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17563256, Length=317, Percent_Identity=24.2902208201893, Blast_Score=75, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6319410, Length=272, Percent_Identity=28.6764705882353, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21355295, Length=198, Percent_Identity=30.8080808080808, Blast_Score=92, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 37976; Mature: 37976

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHSITSHPCDNVSLAQLTELAQSGNSEAQYILGRLYNDERIDGSEEDKLSFYWLQQAAE
CCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
QGHCEAQYWLGLRYKDTPTDMKDNTLALFWSEKAAQQGHRHAFNTLGWVQEGETGMAPDY
CCCCCEEEEEEEEECCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
AQAVAWYRKGAEQSHNLAQYNLGRMYHSGTGVEQNDTQALYWFKQAALQGHCASQERLAY
HHHHHHHHHCCHHCCCHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEE
MYGNGKGCRKNLSLAALWYKKSALQESSYSQYQMGYCYYIGKGIKQDYQQAIYWFRKAAD
EECCCCCCHHCCCCHHHHHHHHHHHCCCCCHHHCCEEEEECCHHHHHHHHHHHHHHHHCC
QGDDDAYNSIGWMYKCGHGVEQNYSLALEWFHKSAECNNSSGWYNLGCMYRDGHGTAQDL
CCCCHHHHHCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHH
QQALYWFKKAQPTGKWNVDEEIRKLEAQLHA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNHSITSHPCDNVSLAQLTELAQSGNSEAQYILGRLYNDERIDGSEEDKLSFYWLQQAAE
CCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
QGHCEAQYWLGLRYKDTPTDMKDNTLALFWSEKAAQQGHRHAFNTLGWVQEGETGMAPDY
CCCCCEEEEEEEEECCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
AQAVAWYRKGAEQSHNLAQYNLGRMYHSGTGVEQNDTQALYWFKQAALQGHCASQERLAY
HHHHHHHHHCCHHCCCHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEE
MYGNGKGCRKNLSLAALWYKKSALQESSYSQYQMGYCYYIGKGIKQDYQQAIYWFRKAAD
EECCCCCCHHCCCCHHHHHHHHHHHCCCCCHHHCCEEEEECCHHHHHHHHHHHHHHHHCC
QGDDDAYNSIGWMYKCGHGVEQNYSLALEWFHKSAECNNSSGWYNLGCMYRDGHGTAQDL
CCCCHHHHHCCCCEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHH
QQALYWFKKAQPTGKWNVDEEIRKLEAQLHA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]