Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
---|---|
Accession | NC_003197 |
Length | 4,857,432 |
Click here to switch to the map view.
The map label for this gene is fepA [H]
Identifier: 16763962
GI number: 16763962
Start: 641558
End: 643813
Strand: Reverse
Name: fepA [H]
Synonym: STM0585
Alternate gene names: 16763962
Gene position: 643813-641558 (Counterclockwise)
Preceding gene: 16763967
Following gene: 16763961
Centisome position: 13.25
GC content: 53.99
Gene sequence:
>2256_bases ATGAACAAGAAGATTCATTCCCTGACCTTACTGGTCAATTTAGGGATTTACGGGGCCACTCTGCCCGTGATGGCGGAAGA CAAAACCGATAGCGCTGCGCTCACCAATGAAGACACCATCGTGGTGACCGCTGCCCAGCAAAACCTACAGGCGCCAGGCG TATCCACCATCACCGCCGATGAGATCCGCAAAAATCCGCCCGCGCGCGACGTGTCAGAAATCATCCGCACCATGCCGGGC GTAAACCTGACCGGCAACTCCACCAGCGGTCAGCGCGGGAATAACCGCCAAATCGATATTCGCGGCATGGGGCCGGAAAA CACCCTCATCCTGATAGACGGTAAACCCGTCACCAGCCGTAACTCGGTGCGCCTGGGCTGGCGCGGCGAACGCGATACCC GCGGCGATACCGCGTGGGTGCCGCCGGAGATGATCGAACGCATTGAAGTGCTGCGTGGCCCTGCCGCCGCACGCTACGGT AACGGCGCGGCGGGTGGCGTAGTCAATATCATTACCAAAAAAGGCGGTAGCGAGTGGCACGGTTCCTGGAATACCTATTT CAACGCGCCGGAACATAAAGACGAAGGCGCGACCAAACGCACTAACTTTAGCCTGAACGGCCCGCTGGGCGGGGATTTCA GCTTCCGCCTGTATGGCAACCTCGACAAAACGCAGGCGGATGCGCGTAATATTAACCAGGGGCATCAGTCTGAACGTACC GGGAGTTACGCCGACACGCTACCAGCAGGACGCGAGGGGGTCATTAACAAAGATATCAACGGCGTGGTTCGTTGGGATTT TGCTCCGCTTCAGTCTCTGGAGCTGGAGGCCGGATACAGTCGCCAGGGCAATCTCTATGCCGGCGATACTCAGAACACCA ATACGAACCAACTGGTGAAAGATAATTACGGAAAAGAGACGAACCGCCTCTATCGGCAGAACTACTCTCTGACCTGGAAC GGCGGCTGGAATAATGGCGTAACCACCAGTAACTGGGTGCAATACGAACATACCCGTAACTCCCGGATGCCGGAAGGCCT GGCAGGCGGCACCGAAGGAATTTTCGATCCCAAAGCATCGCAAAAATATGCCGATGCCGATTTGAATGACGTCACCCTAC ACAGCGAAGTGAGCCTTCCTTTCGATCTGCTGGTCAATCAAAACCTGACGCTGGGTACTGAATGGGCCCAACAGCGTATG AAAGACCAGCTCTCCAACTCGCAAACCTTTATGGGGGGAAATATCCCGGGTTACAGCAGTACCAATCGTAGCCCCTATTC AAAAGCGGAAATTTTCTCTCTGTTTGCTGAAAACAACATGGAACTGACCGACAGCACCATGCTGACGCCGGGGCTACGTT TCGATCATCACAGTATTGTGGGGGATAACTGGAGCCCGTCCCTCAACCTGTCGCAAGGTCTGGGGGATGACTTTACCCTG AAAATGGGAATCGCCCGCGCTTATAAAGCCCCGAGTCTGTACCAGACTAACCCAAACTATATTTTGTACAGTAAAGGTCA GGGTTGCTACGCGACTGGCGCGGGTACCGGCATCGGCTGCTATATGATGGGTAACGATGATCTGAAAGCCGAAACTAGCA TCAATAAAGAGATCGGTCTGGAATTTAAACGCGATGGCTGGCTGGCCGGCGTCACCTGGTTCCGCAATGATTACCGCAAT AAGATTGAAGCGGGTACAGTGCCGTTGCAGCGTATCAACAACGGCAAAACGGATGTTTATCAGTGGGAGAACGTGCCGAA AGCGGTCGTTGAAGGTCTGGAAGGCACGTTAAACGTACCGGTTAGCGACACCGTCAACTGGACGAATAACGTTACGTATA TGCTGCAGAGTAAAAACAAAGAGACCGGCGAACGCCTGTCGATTATTCCACAGTACACGCTTAACTCAACCCTGAGCTGG CAGGTACGTCAGGACGTTTCTCTGCAATCGACCTTCACCTGGTACGGCAAACAAGAGCCGAAGAAATATGATTATCAGGG TAACCCCGTTACCGGAACAGATAAGCAAGCGGTCAGCCCATACAGTATTGTTGGCCTGAGCGCGACCTGGGACGTGACCA AAAATGTCAGCCTGACCGGTGGCGTGGATAACCTCTTTGACAAACGTCTGTGGCGTGAAGGTAACGCGCAAACCGTCAGG GATACGCAAACTGGCGCTTATATGGCGGGCGCTGGCGCGTACACCTATAACGAACCAGGACGTACGTGGTATATGAGCAT TAATACCCATTTCTGA
Upstream 100 bases:
>100_bases TATTGTCGCGCTATGGGACGCGCGAACACAATTTCACCACCCGGCCAATGCCTTTGACGGGCGCTTTGGCTTATGTGGCT AAAGAAAAGCAGGATATACA
Downstream 100 bases:
>100_bases TGGCAACCTTCCCTCCCTCATTCGGGGAGGGAATTGGCAAAAACGATGCTGACATCTCATTTTCCCCTTCCCTTTGCCGG ACACAGGCTGCATATCGTCG
Product: outer membrane receptor FepA
Products: NA
Alternate protein names: Enterobactin outer-membrane receptor [H]
Number of amino acids: Translated: 751; Mature: 751
Protein sequence:
>751_residues MNKKIHSLTLLVNLGIYGATLPVMAEDKTDSAALTNEDTIVVTAAQQNLQAPGVSTITADEIRKNPPARDVSEIIRTMPG VNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTSRNSVRLGWRGERDTRGDTAWVPPEMIERIEVLRGPAAARYG NGAAGGVVNIITKKGGSEWHGSWNTYFNAPEHKDEGATKRTNFSLNGPLGGDFSFRLYGNLDKTQADARNINQGHQSERT GSYADTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNTNQLVKDNYGKETNRLYRQNYSLTWN GGWNNGVTTSNWVQYEHTRNSRMPEGLAGGTEGIFDPKASQKYADADLNDVTLHSEVSLPFDLLVNQNLTLGTEWAQQRM KDQLSNSQTFMGGNIPGYSSTNRSPYSKAEIFSLFAENNMELTDSTMLTPGLRFDHHSIVGDNWSPSLNLSQGLGDDFTL KMGIARAYKAPSLYQTNPNYILYSKGQGCYATGAGTGIGCYMMGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRN KIEAGTVPLQRINNGKTDVYQWENVPKAVVEGLEGTLNVPVSDTVNWTNNVTYMLQSKNKETGERLSIIPQYTLNSTLSW QVRQDVSLQSTFTWYGKQEPKKYDYQGNPVTGTDKQAVSPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWREGNAQTVR DTQTGAYMAGAGAYTYNEPGRTWYMSINTHF
Sequences:
>Translated_751_residues MNKKIHSLTLLVNLGIYGATLPVMAEDKTDSAALTNEDTIVVTAAQQNLQAPGVSTITADEIRKNPPARDVSEIIRTMPG VNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTSRNSVRLGWRGERDTRGDTAWVPPEMIERIEVLRGPAAARYG NGAAGGVVNIITKKGGSEWHGSWNTYFNAPEHKDEGATKRTNFSLNGPLGGDFSFRLYGNLDKTQADARNINQGHQSERT GSYADTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNTNQLVKDNYGKETNRLYRQNYSLTWN GGWNNGVTTSNWVQYEHTRNSRMPEGLAGGTEGIFDPKASQKYADADLNDVTLHSEVSLPFDLLVNQNLTLGTEWAQQRM KDQLSNSQTFMGGNIPGYSSTNRSPYSKAEIFSLFAENNMELTDSTMLTPGLRFDHHSIVGDNWSPSLNLSQGLGDDFTL KMGIARAYKAPSLYQTNPNYILYSKGQGCYATGAGTGIGCYMMGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRN KIEAGTVPLQRINNGKTDVYQWENVPKAVVEGLEGTLNVPVSDTVNWTNNVTYMLQSKNKETGERLSIIPQYTLNSTLSW QVRQDVSLQSTFTWYGKQEPKKYDYQGNPVTGTDKQAVSPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWREGNAQTVR DTQTGAYMAGAGAYTYNEPGRTWYMSINTHF >Mature_751_residues MNKKIHSLTLLVNLGIYGATLPVMAEDKTDSAALTNEDTIVVTAAQQNLQAPGVSTITADEIRKNPPARDVSEIIRTMPG VNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTSRNSVRLGWRGERDTRGDTAWVPPEMIERIEVLRGPAAARYG NGAAGGVVNIITKKGGSEWHGSWNTYFNAPEHKDEGATKRTNFSLNGPLGGDFSFRLYGNLDKTQADARNINQGHQSERT GSYADTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNTNQLVKDNYGKETNRLYRQNYSLTWN GGWNNGVTTSNWVQYEHTRNSRMPEGLAGGTEGIFDPKASQKYADADLNDVTLHSEVSLPFDLLVNQNLTLGTEWAQQRM KDQLSNSQTFMGGNIPGYSSTNRSPYSKAEIFSLFAENNMELTDSTMLTPGLRFDHHSIVGDNWSPSLNLSQGLGDDFTL KMGIARAYKAPSLYQTNPNYILYSKGQGCYATGAGTGIGCYMMGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRN KIEAGTVPLQRINNGKTDVYQWENVPKAVVEGLEGTLNVPVSDTVNWTNNVTYMLQSKNKETGERLSIIPQYTLNSTLSW QVRQDVSLQSTFTWYGKQEPKKYDYQGNPVTGTDKQAVSPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWREGNAQTVR DTQTGAYMAGAGAYTYNEPGRTWYMSINTHF
Specific function: This protein is involved in the initial step of iron uptake by binding ferrienterobactin (Fe-ENT), an iron chelatin siderophore that allows E.coli to extract iron from the environment. FepA also acts as a receptor for colicins B and D [H]
COG id: COG4771
COG function: function code P; Outer membrane receptor for ferrienterochelin and colicins
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786798, Length=755, Percent_Identity=81.4569536423841, Blast_Score=1266, Evalue=0.0, Organism=Escherichia coli, GI1788478, Length=768, Percent_Identity=32.03125, Blast_Score=271, Evalue=8e-74, Organism=Escherichia coli, GI1790405, Length=726, Percent_Identity=25.3443526170799, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI1787723, Length=168, Percent_Identity=30.3571428571429, Blast_Score=66, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 83028; Mature: 83028
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00430 TONB_DEPENDENT_REC_1 ; PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKIHSLTLLVNLGIYGATLPVMAEDKTDSAALTNEDTIVVTAAQQNLQAPGVSTITAD CCCCEEEEEEEEECCCCCCEEEEEECCCCCCCEECCCCEEEEEECCCCCCCCCCCEEEHH EIRKNPPARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTSR HHHCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCC NSVRLGWRGERDTRGDTAWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKGGSEWH CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCCEEEEEECCCCCCCC GSWNTYFNAPEHKDEGATKRTNFSLNGPLGGDFSFRLYGNLDKTQADARNINQGHQSERT CCCCCEECCCCCCCCCCCEECCEEECCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCC GSYADTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNTNQLVK CCHHHCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCEEECCCCCCCCCCHHH DNYGKETNRLYRQNYSLTWNGGWNNGVTTSNWVQYEHTRNSRMPEGLAGGTEGIFDPKAS CCCCCHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC QKYADADLNDVTLHSEVSLPFDLLVNQNLTLGTEWAQQRMKDQLSNSQTFMGGNIPGYSS CCCCCCCCCCEEEECCCCCCEEHEECCCCEECHHHHHHHHHHHHCCCCEEECCCCCCCCC TNRSPYSKAEIFSLFAENNMELTDSTMLTPGLRFDHHSIVGDNWSPSLNLSQGLGDDFTL CCCCCCHHHHHHHHHHCCCCEECCCEEECCCCCCCCCEECCCCCCCCCCHHCCCCCCEEE KMGIARAYKAPSLYQTNPNYILYSKGQGCYATGAGTGIGCYMMGNDDLKAETSINKEIGL EEEHHHHHCCCCEEECCCCEEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCCCHHHCC EFKRDGWLAGVTWFRNDYRNKIEAGTVPLQRINNGKTDVYQWENVPKAVVEGLEGTLNVP EECCCCEEEEHHHHHHHHHCCCCCCCCCHHHCCCCCCCEEECCCCCHHHHHCCCCEEECC VSDTVNWTNNVTYMLQSKNKETGERLSIIPQYTLNSTLSWQVRQDVSLQSTFTWYGKQEP CCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCC KKYDYQGNPVTGTDKQAVSPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWREGNAQTVR CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCHHHHHHHHHHCCCCCCEEE DTQTGAYMAGAGAYTYNEPGRTWYMSINTHF ECCCCCEEECCCCEEECCCCCEEEEEEECCC >Mature Secondary Structure MNKKIHSLTLLVNLGIYGATLPVMAEDKTDSAALTNEDTIVVTAAQQNLQAPGVSTITAD CCCCEEEEEEEEECCCCCCEEEEEECCCCCCCEECCCCEEEEEECCCCCCCCCCCEEEHH EIRKNPPARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTSR HHHCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCC NSVRLGWRGERDTRGDTAWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKGGSEWH CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCCEEEEEECCCCCCCC GSWNTYFNAPEHKDEGATKRTNFSLNGPLGGDFSFRLYGNLDKTQADARNINQGHQSERT CCCCCEECCCCCCCCCCCEECCEEECCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCC GSYADTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNTNQLVK CCHHHCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCEEECCCCCCCCCCHHH DNYGKETNRLYRQNYSLTWNGGWNNGVTTSNWVQYEHTRNSRMPEGLAGGTEGIFDPKAS CCCCCHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC QKYADADLNDVTLHSEVSLPFDLLVNQNLTLGTEWAQQRMKDQLSNSQTFMGGNIPGYSS CCCCCCCCCCEEEECCCCCCEEHEECCCCEECHHHHHHHHHHHHCCCCEEECCCCCCCCC TNRSPYSKAEIFSLFAENNMELTDSTMLTPGLRFDHHSIVGDNWSPSLNLSQGLGDDFTL CCCCCCHHHHHHHHHHCCCCEECCCEEECCCCCCCCCEECCCCCCCCCCHHCCCCCCEEE KMGIARAYKAPSLYQTNPNYILYSKGQGCYATGAGTGIGCYMMGNDDLKAETSINKEIGL EEEHHHHHCCCCEEECCCCEEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCCCHHHCC EFKRDGWLAGVTWFRNDYRNKIEAGTVPLQRINNGKTDVYQWENVPKAVVEGLEGTLNVP EECCCCEEEEHHHHHHHHHCCCCCCCCCHHHCCCCCCCEEECCCCCHHHHHCCCCEEECC VSDTVNWTNNVTYMLQSKNKETGERLSIIPQYTLNSTLSWQVRQDVSLQSTFTWYGKQEP CCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCC KKYDYQGNPVTGTDKQAVSPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWREGNAQTVR CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCHHHHHHHHHHCCCCCCEEE DTQTGAYMAGAGAYTYNEPGRTWYMSINTHF ECCCCCEEECCCCEEECCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3015941; 8905232; 9278503; 2974033; 2526281; 2201687; 9886293 [H]