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The map label for this gene is ybdJ [H]

Identifier: 16763959

GI number: 16763959

Start: 639363

End: 639611

Strand: Reverse

Name: ybdJ [H]

Synonym: STM0582

Alternate gene names: 16763959

Gene position: 639611-639363 (Counterclockwise)

Preceding gene: 16763960

Following gene: 16763957

Centisome position: 13.17

GC content: 51.0

Gene sequence:

>249_bases
ATGAAACACCCGCTTGAATCATTGATGACCGCTGCCGGTATTTTGCTGATGGCGTTGCTCTCCAGCCTGCTGCTGCCCGC
CCCTTCGCTCGGCCTTGCGCTGGCGCAAAAACTGGTCGGGATCTTTCATCTTATGGATCTCAACCAGCTTTATACTTTGT
TGTTTTGTTTATGGTTTCTGTTGCTCGGCGCGCTGGAATATTATGTCATTCGCTTTATCTGGCGGCGCTGGTTTTCGCTG
GCCGATTAA

Upstream 100 bases:

>100_bases
ACAAAAACATTGTGAAATCTGGGCGGGACAATAGACAGCATATTTGCCTTACCAGGCGATATCCCGGACAATGGCGTTTT
AACTTACGTTTAACAAAGCC

Downstream 100 bases:

>100_bases
ACATTTCAATGCGTACGGCCATGCTTTTCTTTACGATAAGCGCCTGGCGGCAGGTTGAACGTGCGGGTAAAAATGCGCGT
AAAGGTTTGCTGCGAATCAA

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MKHPLESLMTAAGILLMALLSSLLLPAPSLGLALAQKLVGIFHLMDLNQLYTLLFCLWFLLLGALEYYVIRFIWRRWFSL
AD

Sequences:

>Translated_82_residues
MKHPLESLMTAAGILLMALLSSLLLPAPSLGLALAQKLVGIFHLMDLNQLYTLLFCLWFLLLGALEYYVIRFIWRRWFSL
AD
>Mature_82_residues
MKHPLESLMTAAGILLMALLSSLLLPAPSLGLALAQKLVGIFHLMDLNQLYTLLFCLWFLLLGALEYYVIRFIWRRWFSL
AD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786794, Length=82, Percent_Identity=85.3658536585366, Blast_Score=118, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010590
- ProDom:   PD027061 [H]

Pfam domain/function: PF06643 DUF1158 [H]

EC number: NA

Molecular weight: Translated: 9381; Mature: 9381

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHPLESLMTAAGILLMALLSSLLLPAPSLGLALAQKLVGIFHLMDLNQLYTLLFCLWFL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGALEYYVIRFIWRRWFSLAD
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKHPLESLMTAAGILLMALLSSLLLPAPSLGLALAQKLVGIFHLMDLNQLYTLLFCLWFL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGALEYYVIRFIWRRWFSLAD
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]