| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is apeE [H]
Identifier: 16763947
GI number: 16763947
Start: 627193
End: 629163
Strand: Direct
Name: apeE [H]
Synonym: STM0570
Alternate gene names: 16763947
Gene position: 627193-629163 (Clockwise)
Preceding gene: 16763945
Following gene: 16763948
Centisome position: 12.91
GC content: 55.71
Gene sequence:
>1971_bases ATGACCCAAAAGCGTACCCTGCTAAAATACGGCATACTCTCGCTGGCGCTGGCCGCGCCATTATCTGCCTGTGCGTTTGA CTCTCTTACGGTGATTGGCGATAGCCTTAGCGATACCGGTAATAACGGTCGCTGGACCTGGGATAGTGGTCAAAATAAGC TCTACGACGAACAGTTGGCCGAACGATATGGGCTGGAATTAAGCCCTTCCAGCAATGGCGGCTCTAATTATGCCGCCGGC GGCGCGACGGCGACCCCGGAATTAAACCCGCAGGATAATACCGCGGATCAGGTACGGCAGTGGCTTGCCAAAACGGGGGG AAAAGCCGACCACAACGGTTTGTATATTCACTGGGTCGGCGGAAACGATCTGGCGGCGGCCATCGCGCAACCAACCATGG CACAGCAAATAGCCGGTAATAGCGCCACTAGCGCGGCGGCGCAGGTAGGGCTGTTACTGGATGCCGGCGCCGGGCTGGTC GTGGTGCCAAACGTACCGGATATTAGTGCGACGCCAATGCTTCTGGAGGCGGTAATCACCGCTGGGCTGGGCGCAGCGGC GCCCCCGGCGCTAAAAGCGGCGTTAGATGCGCTGGCGGAGGGCGCTACGCCCGATTTCGCCAGTCGGCAACAGGCGATCC GCAAGGCGCTGCTGGCGGCGGCTGCAACGGTAAGCAGCAATCCATTTATTCAGCAACTGCTCGTTGAACAACTGCTGGCG GGCTATGAAGCGGCGGCAGGGCAGGCGTCAGCTCTGACCGATTATTATAATCAGATGGAAGAGAAGGGGCTGGAGCAACA CGGCGGCAATATAGCCCGTGCCGATATCAACGGCCTCTTTAAGGAAATTCTTGCCAACCCGCAGGCGTTTGGTCTGACAA ATACCGTAGGTATGGCCTGCCCGCCTGGCGTATCCGCTTCGGCGTGCTCCTCGGCAATGCCTGGATTTAATGCGTCGCAG GACTATCTGTTTGCCGATCATTTACATCCCGGTCCGCAGGTCCATACCATTATTGCGCAATATATTCAGTCGATCATTGC CGCGCCGGTACAGGCGACATACCTGAACCAAAGCGTTCAGTCGATGGCGCAAGGCAGTCGTACCACGCTTGACAGCCGTT ATCAGCAGCTTCGCCAGGGGGAAAATCCTGTTGGTTCGCTGGGCATGTTCGGCGGATACAGCGGGGGATATCAACGTTAT GATAATAATGAGGCCGACGGGAACGGTAATCATAATAATCTGACGGTTGGCGTCGATTATCAGCTTAACGAGCAGGTTCT GCTGGGAGGGCTGATAGCCGGTTCTCTGGATAAGCAACATCCTGACGATAATTATCGTTATGATGCCCGCGGTTTTCAGG CCGCCGTATTCAGCCATTTACGCGCCGGTCAGGCGTGGCTGGATAGCGATTTACACTTTCTGTCCGCTAAATTCAGTAAC ATTCAGCGCAGTATAACGCTCGGTGCGCTAAGACGGGTGGAAGAGGGCGAAACCAACGGTCGGCTGTGGGGCGCGAGGTT AACCAGCGGTTATGATTTTGTCATGGTGCCGTGGTTAACGACCGGACCGATGCTGCAATATGCATGGGATTACAGCCACG TTAATGGTTATAGCGAGAAGCTCAATACCAGTACATCAATGCGTTTTGGTGACCAAAACGCCCATTCGCAGGTGGGTAGC GCGGGTTGGCGTCTGGATCTTCGCCACAGCATCATTCACTCCTGGGCGCAGATTAATTATCGCCGTCAGTTTGGCGATGA TACGTATGTGGCGAACGGCGGCCTTAAATCGACCGCGCTGACGTTTAGCCGCGACGGAAAAACGCAGGATAAAAACTGGG TTGATATCGCGATTGGCGCAGATTTTCCGCTGTCGGCAACGGTGTCCGCTTTCGCCGGGCTGTCGCAAACGGCAGGGTTA AGCGATGGCAATCAAACCCGTTATAACGTTGGGTTTAGCGCCCGATTTTGA
Upstream 100 bases:
>100_bases GAAAATTTTTTAACCAGAATGTTTAAAACGATTGCAATATCTCTGTCGGATAATGATTAGCACCGTCGTACCTATCAACA ATAACATTAAGGAACATCGG
Downstream 100 bases:
>100_bases TGACACGCCAGGGAGGGCCAACCCCGTTCGTTCGTGACACGATGAGCCGAAAGCGCAACGGTAAGTTTTATAAAAAGTAA GTATTTTCAAAAATGTGGGT
Product: outer membrane esterase
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 656; Mature: 655
Protein sequence:
>656_residues MTQKRTLLKYGILSLALAAPLSACAFDSLTVIGDSLSDTGNNGRWTWDSGQNKLYDEQLAERYGLELSPSSNGGSNYAAG GATATPELNPQDNTADQVRQWLAKTGGKADHNGLYIHWVGGNDLAAAIAQPTMAQQIAGNSATSAAAQVGLLLDAGAGLV VVPNVPDISATPMLLEAVITAGLGAAAPPALKAALDALAEGATPDFASRQQAIRKALLAAAATVSSNPFIQQLLVEQLLA GYEAAAGQASALTDYYNQMEEKGLEQHGGNIARADINGLFKEILANPQAFGLTNTVGMACPPGVSASACSSAMPGFNASQ DYLFADHLHPGPQVHTIIAQYIQSIIAAPVQATYLNQSVQSMAQGSRTTLDSRYQQLRQGENPVGSLGMFGGYSGGYQRY DNNEADGNGNHNNLTVGVDYQLNEQVLLGGLIAGSLDKQHPDDNYRYDARGFQAAVFSHLRAGQAWLDSDLHFLSAKFSN IQRSITLGALRRVEEGETNGRLWGARLTSGYDFVMVPWLTTGPMLQYAWDYSHVNGYSEKLNTSTSMRFGDQNAHSQVGS AGWRLDLRHSIIHSWAQINYRRQFGDDTYVANGGLKSTALTFSRDGKTQDKNWVDIAIGADFPLSATVSAFAGLSQTAGL SDGNQTRYNVGFSARF
Sequences:
>Translated_656_residues MTQKRTLLKYGILSLALAAPLSACAFDSLTVIGDSLSDTGNNGRWTWDSGQNKLYDEQLAERYGLELSPSSNGGSNYAAG GATATPELNPQDNTADQVRQWLAKTGGKADHNGLYIHWVGGNDLAAAIAQPTMAQQIAGNSATSAAAQVGLLLDAGAGLV VVPNVPDISATPMLLEAVITAGLGAAAPPALKAALDALAEGATPDFASRQQAIRKALLAAAATVSSNPFIQQLLVEQLLA GYEAAAGQASALTDYYNQMEEKGLEQHGGNIARADINGLFKEILANPQAFGLTNTVGMACPPGVSASACSSAMPGFNASQ DYLFADHLHPGPQVHTIIAQYIQSIIAAPVQATYLNQSVQSMAQGSRTTLDSRYQQLRQGENPVGSLGMFGGYSGGYQRY DNNEADGNGNHNNLTVGVDYQLNEQVLLGGLIAGSLDKQHPDDNYRYDARGFQAAVFSHLRAGQAWLDSDLHFLSAKFSN IQRSITLGALRRVEEGETNGRLWGARLTSGYDFVMVPWLTTGPMLQYAWDYSHVNGYSEKLNTSTSMRFGDQNAHSQVGS AGWRLDLRHSIIHSWAQINYRRQFGDDTYVANGGLKSTALTFSRDGKTQDKNWVDIAIGADFPLSATVSAFAGLSQTAGL SDGNQTRYNVGFSARF >Mature_655_residues TQKRTLLKYGILSLALAAPLSACAFDSLTVIGDSLSDTGNNGRWTWDSGQNKLYDEQLAERYGLELSPSSNGGSNYAAGG ATATPELNPQDNTADQVRQWLAKTGGKADHNGLYIHWVGGNDLAAAIAQPTMAQQIAGNSATSAAAQVGLLLDAGAGLVV VPNVPDISATPMLLEAVITAGLGAAAPPALKAALDALAEGATPDFASRQQAIRKALLAAAATVSSNPFIQQLLVEQLLAG YEAAAGQASALTDYYNQMEEKGLEQHGGNIARADINGLFKEILANPQAFGLTNTVGMACPPGVSASACSSAMPGFNASQD YLFADHLHPGPQVHTIIAQYIQSIIAAPVQATYLNQSVQSMAQGSRTTLDSRYQQLRQGENPVGSLGMFGGYSGGYQRYD NNEADGNGNHNNLTVGVDYQLNEQVLLGGLIAGSLDKQHPDDNYRYDARGFQAAVFSHLRAGQAWLDSDLHFLSAKFSNI QRSITLGALRRVEEGETNGRLWGARLTSGYDFVMVPWLTTGPMLQYAWDYSHVNGYSEKLNTSTSMRFGDQNAHSQVGSA GWRLDLRHSIIHSWAQINYRRQFGDDTYVANGGLKSTALTFSRDGKTQDKNWVDIAIGADFPLSATVSAFAGLSQTAGLS DGNQTRYNVGFSARF
Specific function: Unknown
COG id: COG3240
COG function: function code IR; Phospholipase/lecithinase/hemolysin
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]
Homologues:
Organism=Escherichia coli, GI87082287, Length=184, Percent_Identity=29.8913043478261, Blast_Score=88, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR013830 - InterPro: IPR017186 - InterPro: IPR001087 - InterPro: IPR008265 - InterPro: IPR006315 [H]
Pfam domain/function: PF03797 Autotransporter; PF00657 Lipase_GDSL [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 69862; Mature: 69731
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKRTLLKYGILSLALAAPLSACAFDSLTVIGDSLSDTGNNGRWTWDSGQNKLYDEQLA CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCEECCCCCCCHHHHHHH ERYGLELSPSSNGGSNYAAGGATATPELNPQDNTADQVRQWLAKTGGKADHNGLYIHWVG HHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEC GNDLAAAIAQPTMAQQIAGNSATSAAAQVGLLLDAGAGLVVVPNVPDISATPMLLEAVIT CCHHHHHHHCCHHHHHHCCCCHHHHHHHHEEEEECCCCEEEECCCCCCCCCHHHHHHHHH AGLGAAAPPALKAALDALAEGATPDFASRQQAIRKALLAAAATVSSNPFIQQLLVEQLLA HCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GYEAAAGQASALTDYYNQMEEKGLEQHGGNIARADINGLFKEILANPQAFGLTNTVGMAC CHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCC PPGVSASACSSAMPGFNASQDYLFADHLHPGPQVHTIIAQYIQSIIAAPVQATYLNQSVQ CCCCCHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH SMAQGSRTTLDSRYQQLRQGENPVGSLGMFGGYSGGYQRYDNNEADGNGNHNNLTVGVDY HHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC QLNEQVLLGGLIAGSLDKQHPDDNYRYDARGFQAAVFSHLRAGQAWLDSDLHFLSAKFSN EECCHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHH IQRSITLGALRRVEEGETNGRLWGARLTSGYDFVMVPWLTTGPMLQYAWDYSHVNGYSEK HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCCCCCCHHEEECHHHCCCHHHH LNTSTSMRFGDQNAHSQVGSAGWRLDLRHSIIHSWAQINYRRQFGDDTYVANGGLKSTAL HCCCCCEECCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEE TFSRDGKTQDKNWVDIAIGADFPLSATVSAFAGLSQTAGLSDGNQTRYNVGFSARF EEECCCCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHCCCCCCCCEEEECCEECCC >Mature Secondary Structure TQKRTLLKYGILSLALAAPLSACAFDSLTVIGDSLSDTGNNGRWTWDSGQNKLYDEQLA CCCHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCEECCCCCCCHHHHHHH ERYGLELSPSSNGGSNYAAGGATATPELNPQDNTADQVRQWLAKTGGKADHNGLYIHWVG HHHCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEC GNDLAAAIAQPTMAQQIAGNSATSAAAQVGLLLDAGAGLVVVPNVPDISATPMLLEAVIT CCHHHHHHHCCHHHHHHCCCCHHHHHHHHEEEEECCCCEEEECCCCCCCCCHHHHHHHHH AGLGAAAPPALKAALDALAEGATPDFASRQQAIRKALLAAAATVSSNPFIQQLLVEQLLA HCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GYEAAAGQASALTDYYNQMEEKGLEQHGGNIARADINGLFKEILANPQAFGLTNTVGMAC CHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCC PPGVSASACSSAMPGFNASQDYLFADHLHPGPQVHTIIAQYIQSIIAAPVQATYLNQSVQ CCCCCHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH SMAQGSRTTLDSRYQQLRQGENPVGSLGMFGGYSGGYQRYDNNEADGNGNHNNLTVGVDY HHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC QLNEQVLLGGLIAGSLDKQHPDDNYRYDARGFQAAVFSHLRAGQAWLDSDLHFLSAKFSN EECCHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHCCHHHHHCCHHHHHHHHHH IQRSITLGALRRVEEGETNGRLWGARLTSGYDFVMVPWLTTGPMLQYAWDYSHVNGYSEK HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCCCCCCHHEEECHHHCCCHHHH LNTSTSMRFGDQNAHSQVGSAGWRLDLRHSIIHSWAQINYRRQFGDDTYVANGGLKSTAL HCCCCCEECCCCHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEE TFSRDGKTQDKNWVDIAIGADFPLSATVSAFAGLSQTAGLSDGNQTRYNVGFSARF EEECCCCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHCCCCCCCCEEEECCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8449874 [H]