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The map label for this gene is yybO [H]

Identifier: 16763900

GI number: 16763900

Start: 581082

End: 582329

Strand: Direct

Name: yybO [H]

Synonym: STM0520

Alternate gene names: 16763900

Gene position: 581082-582329 (Clockwise)

Preceding gene: 16763899

Following gene: 16763901

Centisome position: 11.96

GC content: 46.07

Gene sequence:

>1248_bases
ATGAGTGAAACTAAAAAATCCGGAATTGATTACTGGAAACAAATTGTTGTCGTAATGAGTCTGGGCTGGGTAGCGATTTG
GATCTATCGCACCGTGCTTACGCCAATTTATCCAGAAATTCAGGCATCTTTAGACAATGTAAGTAATGCTGAAATAGGCG
CCATTGCAAGTTTTTACTTTTTTGCTTACTGCAGTATGCAAATCCCTTGCGGAATATTGGTCGATAAATTCGGTCAAAAA
ATCATGCTGATGGCCGGATTTACGCTTTTTATTATTGGTACACTCTGTATCGCGAAAGCCAATGGCCTGACCATGATCTA
TATAGGGTCGCTAATGGCAGGTGGCGGATGCGCTTCTTTCTTTAGCTCGGCTTATTCACTCTCTTCGGCAAACGTGCCGC
AGGCCCGTCGGGCATTAGCCAACGCAATTATCAACAGCGGGTCGGCTATAGGGATGGGGATTGGCTTAATCGGTTCCAGC
ATATTAGTAAAAAACATGAGCATGGCCTGGCAAAATGTACTGTATATCGTGGCCGCGATATTAGTAATCATGCTGTGCGT
CTTTACGCTGATCATTCGCGGTAAAGCCAAAAGCGACTCTGCGCAAGCGGAAAAGCAAACCCAAACCGTTACGGAAGATG
AGAAACGCGCGCCTTTATTCTCTGGTTTATTGTGTAGCGTTTACTTCCTCTATTTCTGTACCTGCTACGGTTATTATTTG
ATAGTGACCTGGCTGCCCTCTTATCTCCAGACTGAAAGAGGATTTGATGGCGGAGCTATCGGGCTGGCATCAGCGCTGGT
GGCGGTGGTTGGCGTACCGGGGGCGTTATTTTTTAGCCATCTGTCAGATAAATTCCGTAACAGTAAAGTTAAGGTTATTC
TCGGTCTGGAAATTGTGGCGGCAGCAATGTTGGCGTTTACGGTTTTGTCCCCGAATACCACGATGCTGATGGTCAGCCTG
ACGCTATACGGCTTGCTGGGGAAAATGGCGGTAGACCCGATCCTGATCTCCTTTGTATCTGAACAGGCTTCGGCAAAAAG
TCTGGGAAGAGCTTTCAGCCTTTTTAACTTCTTTGGCATGAGTTCAGCGGTTGTCGCCCCAACGTTGACCGGATTTATTT
CGGATGTAACGGGGTCGAAAGAGATCAGTTTTGTGATTTCAGCATGTTTAGTGGTCACCGGAACGCTGATCTTTGCTGTC
GTCACTTTATATAAAAAGAAAGCAACGCAACGTATTGCTTCAGCTTAA

Upstream 100 bases:

>100_bases
CGCTGGAATTAATGGCCAATCATAAATTGTCCTAATTATGTGTATCGCTGCGGCTGCAGCGATACCTGTTCACAAGGAAC
ACTCTGTAAAGGTGAAGAAC

Downstream 100 bases:

>100_bases
AAATAATTATATCTACTAATTCTTTATTTTATATTTATTTGTTCCTCATAGCTAAACCCATAACAACGTTATCCGATGCG
TGAAAAGAGGGATTTATGGA

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MSETKKSGIDYWKQIVVVMSLGWVAIWIYRTVLTPIYPEIQASLDNVSNAEIGAIASFYFFAYCSMQIPCGILVDKFGQK
IMLMAGFTLFIIGTLCIAKANGLTMIYIGSLMAGGGCASFFSSAYSLSSANVPQARRALANAIINSGSAIGMGIGLIGSS
ILVKNMSMAWQNVLYIVAAILVIMLCVFTLIIRGKAKSDSAQAEKQTQTVTEDEKRAPLFSGLLCSVYFLYFCTCYGYYL
IVTWLPSYLQTERGFDGGAIGLASALVAVVGVPGALFFSHLSDKFRNSKVKVILGLEIVAAAMLAFTVLSPNTTMLMVSL
TLYGLLGKMAVDPILISFVSEQASAKSLGRAFSLFNFFGMSSAVVAPTLTGFISDVTGSKEISFVISACLVVTGTLIFAV
VTLYKKKATQRIASA

Sequences:

>Translated_415_residues
MSETKKSGIDYWKQIVVVMSLGWVAIWIYRTVLTPIYPEIQASLDNVSNAEIGAIASFYFFAYCSMQIPCGILVDKFGQK
IMLMAGFTLFIIGTLCIAKANGLTMIYIGSLMAGGGCASFFSSAYSLSSANVPQARRALANAIINSGSAIGMGIGLIGSS
ILVKNMSMAWQNVLYIVAAILVIMLCVFTLIIRGKAKSDSAQAEKQTQTVTEDEKRAPLFSGLLCSVYFLYFCTCYGYYL
IVTWLPSYLQTERGFDGGAIGLASALVAVVGVPGALFFSHLSDKFRNSKVKVILGLEIVAAAMLAFTVLSPNTTMLMVSL
TLYGLLGKMAVDPILISFVSEQASAKSLGRAFSLFNFFGMSSAVVAPTLTGFISDVTGSKEISFVISACLVVTGTLIFAV
VTLYKKKATQRIASA
>Mature_414_residues
SETKKSGIDYWKQIVVVMSLGWVAIWIYRTVLTPIYPEIQASLDNVSNAEIGAIASFYFFAYCSMQIPCGILVDKFGQKI
MLMAGFTLFIIGTLCIAKANGLTMIYIGSLMAGGGCASFFSSAYSLSSANVPQARRALANAIINSGSAIGMGIGLIGSSI
LVKNMSMAWQNVLYIVAAILVIMLCVFTLIIRGKAKSDSAQAEKQTQTVTEDEKRAPLFSGLLCSVYFLYFCTCYGYYLI
VTWLPSYLQTERGFDGGAIGLASALVAVVGVPGALFFSHLSDKFRNSKVKVILGLEIVAAAMLAFTVLSPNTTMLMVSLT
LYGLLGKMAVDPILISFVSEQASAKSLGRAFSLFNFFGMSSAVVAPTLTGFISDVTGSKEISFVISACLVVTGTLIFAVV
TLYKKKATQRIASA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI2367379, Length=380, Percent_Identity=24.7368421052632, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1789515, Length=424, Percent_Identity=23.5849056603774, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI87082320, Length=381, Percent_Identity=22.5721784776903, Blast_Score=68, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24584153, Length=362, Percent_Identity=25.1381215469613, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44435; Mature: 44304

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SETKKSGIDYWKQIVVVMSLGWVAIWIYRTVLTPIYPEIQASLDNVSNAEIGAIASFYF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHH
FAYCSMQIPCGILVDKFGQKIMLMAGFTLFIIGTLCIAKANGLTMIYIGSLMAGGGCASF
HHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHH
FSSAYSLSSANVPQARRALANAIINSGSAIGMGIGLIGSSILVKNMSMAWQNVLYIVAAI
HHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVIMLCVFTLIIRGKAKSDSAQAEKQTQTVTEDEKRAPLFSGLLCSVYFLYFCTCYGYYL
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH
IVTWLPSYLQTERGFDGGAIGLASALVAVVGVPGALFFSHLSDKFRNSKVKVILGLEIVA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECHHHHH
AAMLAFTVLSPNTTMLMVSLTLYGLLGKMAVDPILISFVSEQASAKSLGRAFSLFNFFGM
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SSAVVAPTLTGFISDVTGSKEISFVISACLVVTGTLIFAVVTLYKKKATQRIASA
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]