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The map label for this gene is ybaP [H]

Identifier: 16763876

GI number: 16763876

Start: 556084

End: 556878

Strand: Reverse

Name: ybaP [H]

Synonym: STM0496

Alternate gene names: 16763876

Gene position: 556878-556084 (Counterclockwise)

Preceding gene: 16763877

Following gene: 16763875

Centisome position: 11.46

GC content: 57.11

Gene sequence:

>795_bases
ATGGAGCTATTAAATCAACTTAAACGTTTATGGCGCGCGCTGCGTGGTACCCCAAATAGTTGGCCTGCTATCGATCTCTC
CCTGCCCGGCGGTCGTCATCTGCATCTGGTTGGCAGTATTCATATGGGGACGCGCGATATGGCTCCTCTTCCAGCAAAGC
TGGTGAAAAAGCTACACCAGGCCGACGCGCTGGTCGTTGAAGCGGATATTTCTGGTAACGAAACGCCATTCAGCAATCTC
CCCAAATGCCCGCCGTTGGTCGAACGTCTCAGCGCCGGGCAGCTAAGCGCACTGGAAAAACGGGTCAGTGAGTTGGGTAT
GCCGCTGATCCATTTTGATAATCAACCTTTATGGCAGATAGCTATGGTGCTACAGGCCACGCAGGCGCAACGGCTGGGAT
TGCGCCCGGACTATGGCATTGATTATCAGCTATTACAGGCTGCCCGCGAAATGTCGCTGCCGGTGCAAGAGCTGGAAGGG
GCGAAACACCAGCTCGAACTACTCTGCGATCTGCCCGATGGCGGGATGGCGCTGCTCGACGACACGCTGACGCACTGGCA
CACCAACGCACGGCTTTTGCAGGTGATGATCGGCTGGTGGCTTGAGCAGCCGCCGACCAGCGTCGGCGCTTCGCTCCCCA
GAACGTTTAGCCAGCCGCTGTATGATGTACTGATGGTGAAACGCAATGAAGCCTGGCGCGACGCGCTGCTGGCACTGCCG
CCGGGACGCTACGTGGTAGCCGTAGGGGCGCTACATCTGTACGGCGAAGGCAACCTACCGCAAATATTGAAATAA

Upstream 100 bases:

>100_bases
GACGGCAGCGAATAACCCGACCGATCGTTGACGTCCCGTCAGGGCGCATTGCGCCCTTTTCTCCAACGCGCTAGCATGAG
CTTTTTCAAAGGGAGCGCGT

Downstream 100 bases:

>100_bases
AAAAATGGCCAATATCGCTATTGGCCCGTCAAAGAGGAATTTCATCGTTATTATTATCCCGACGCTTTCGCTTCGGATCT
TCAGATTGTCGCTCAAAGTT

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MELLNQLKRLWRALRGTPNSWPAIDLSLPGGRHLHLVGSIHMGTRDMAPLPAKLVKKLHQADALVVEADISGNETPFSNL
PKCPPLVERLSAGQLSALEKRVSELGMPLIHFDNQPLWQIAMVLQATQAQRLGLRPDYGIDYQLLQAAREMSLPVQELEG
AKHQLELLCDLPDGGMALLDDTLTHWHTNARLLQVMIGWWLEQPPTSVGASLPRTFSQPLYDVLMVKRNEAWRDALLALP
PGRYVVAVGALHLYGEGNLPQILK

Sequences:

>Translated_264_residues
MELLNQLKRLWRALRGTPNSWPAIDLSLPGGRHLHLVGSIHMGTRDMAPLPAKLVKKLHQADALVVEADISGNETPFSNL
PKCPPLVERLSAGQLSALEKRVSELGMPLIHFDNQPLWQIAMVLQATQAQRLGLRPDYGIDYQLLQAAREMSLPVQELEG
AKHQLELLCDLPDGGMALLDDTLTHWHTNARLLQVMIGWWLEQPPTSVGASLPRTFSQPLYDVLMVKRNEAWRDALLALP
PGRYVVAVGALHLYGEGNLPQILK
>Mature_264_residues
MELLNQLKRLWRALRGTPNSWPAIDLSLPGGRHLHLVGSIHMGTRDMAPLPAKLVKKLHQADALVVEADISGNETPFSNL
PKCPPLVERLSAGQLSALEKRVSELGMPLIHFDNQPLWQIAMVLQATQAQRLGLRPDYGIDYQLLQAAREMSLPVQELEG
AKHQLELLCDLPDGGMALLDDTLTHWHTNARLLQVMIGWWLEQPPTSVGASLPRTFSQPLYDVLMVKRNEAWRDALLALP
PGRYVVAVGALHLYGEGNLPQILK

Specific function: Unknown

COG id: COG3735

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786689, Length=264, Percent_Identity=66.2878787878788, Blast_Score=362, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010891 [H]

Pfam domain/function: PF07446 GumN [H]

EC number: NA

Molecular weight: Translated: 29372; Mature: 29372

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLNQLKRLWRALRGTPNSWPAIDLSLPGGRHLHLVGSIHMGTRDMAPLPAKLVKKLHQ
CHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHH
ADALVVEADISGNETPFSNLPKCPPLVERLSAGQLSALEKRVSELGMPLIHFDNQPLWQI
CCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCHHHHH
AMVLQATQAQRLGLRPDYGIDYQLLQAAREMSLPVQELEGAKHQLELLCDLPDGGMALLD
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCHHEEEEEEECCCCCHHHHH
DTLTHWHTNARLLQVMIGWWLEQPPTSVGASLPRTFSQPLYDVLMVKRNEAWRDALLALP
HHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCC
PGRYVVAVGALHLYGEGNLPQILK
CCCEEEEEEEEEEECCCCCHHHCC
>Mature Secondary Structure
MELLNQLKRLWRALRGTPNSWPAIDLSLPGGRHLHLVGSIHMGTRDMAPLPAKLVKKLHQ
CHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHH
ADALVVEADISGNETPFSNLPKCPPLVERLSAGQLSALEKRVSELGMPLIHFDNQPLWQI
CCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCHHHHH
AMVLQATQAQRLGLRPDYGIDYQLLQAAREMSLPVQELEGAKHQLELLCDLPDGGMALLD
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCHHEEEEEEECCCCCHHHHH
DTLTHWHTNARLLQVMIGWWLEQPPTSVGASLPRTFSQPLYDVLMVKRNEAWRDALLALP
HHHHHHCCHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCC
PGRYVVAVGALHLYGEGNLPQILK
CCCEEEEEEEEEEECCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]