| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16763721
Identifier: 16763721
GI number: 16763721
Start: 385573
End: 386337
Strand: Direct
Name: 16763721
Synonym: STM0341
Alternate gene names: NA
Gene position: 385573-386337 (Clockwise)
Preceding gene: 16763715
Following gene: 16763722
Centisome position: 7.94
GC content: 36.08
Gene sequence:
>765_bases ATGATGGATGCAGTTACCTTTAGGATTGTCATGAATGAAACTATATTTTTACTTGATAAGCGTGTTGTATTTGATAGTAC GAAGATGACCTTATCGCATGGTAATGAGATAATCAGAATATCAGAAGCTGAGACCCATCTGCTTCTTGCTTTTTGGCATG GTCTTTACAAAAAAGAAGATATTATTCATTTTGTTTGGGAAAATCGTGGAGGCTGCGTCTCAGAATCAAGTTACTATAAA CTCATTAATCAAATGAGAAATGATTTTAGTAGCATTGGTCTACAGTCATCTGACATCGTAACTCGCCCTCGGGTGGGGGT ATCGCTGTCTGTTGCCATTGAACCTATAAAAAAAATCACCTCCCTAAAGGTGAGTGATGAAAACGTTAAAGGCACCACGA CTCGGGAGAACATATTTTACAAAAATAAACGTCACAGCGTATTTGTGGTATTAACAGGAGCCATTCTTCTGGCATTGCTC TATGGTGTATTTACTATATATAAAGCGCCTGTTCGTAACAGCCCTGATAGTTTTTTTACATATCTTGGCGAATATAACGA TTATGCAATCTATAAAACAAAAGAGGATAAGGTCACATTAAGTGAAGTAGTTTTTGCTTTTAACTCTCTAAAAATTAAAA TTTACCGGCAAAATGGACGCCATCTTTATTATATCAGGGAGCCTAATATGAATATTTTTCTGCAATGCTTAAATCCTGTT GAAATGGCGGTGCCAAAATGTATTACAGTAAAAGAACGTTACTGA
Upstream 100 bases:
>100_bases CTTGTGTCAATTATTGTTTACTATAAGTGAGACTTATAAGTTAAACTCAGGTTAATTAGGGGGCTGAATTCTTTTTTGAG CATGATAATATGTCGTCTGA
Downstream 100 bases:
>100_bases TTATATTTGTAATATTTATCGCCATTGTCGCAATCGGATCGATAATAGCGCTTGAGTGGGTAAATCGTGACTCTTATAGA ACCAATAATCTTATATGCAC
Product: inner membrane protein
Products: NA
Alternate protein names: Inner Membrane Protein
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MMDAVTFRIVMNETIFLLDKRVVFDSTKMTLSHGNEIIRISEAETHLLLAFWHGLYKKEDIIHFVWENRGGCVSESSYYK LINQMRNDFSSIGLQSSDIVTRPRVGVSLSVAIEPIKKITSLKVSDENVKGTTTRENIFYKNKRHSVFVVLTGAILLALL YGVFTIYKAPVRNSPDSFFTYLGEYNDYAIYKTKEDKVTLSEVVFAFNSLKIKIYRQNGRHLYYIREPNMNIFLQCLNPV EMAVPKCITVKERY
Sequences:
>Translated_254_residues MMDAVTFRIVMNETIFLLDKRVVFDSTKMTLSHGNEIIRISEAETHLLLAFWHGLYKKEDIIHFVWENRGGCVSESSYYK LINQMRNDFSSIGLQSSDIVTRPRVGVSLSVAIEPIKKITSLKVSDENVKGTTTRENIFYKNKRHSVFVVLTGAILLALL YGVFTIYKAPVRNSPDSFFTYLGEYNDYAIYKTKEDKVTLSEVVFAFNSLKIKIYRQNGRHLYYIREPNMNIFLQCLNPV EMAVPKCITVKERY >Mature_254_residues MMDAVTFRIVMNETIFLLDKRVVFDSTKMTLSHGNEIIRISEAETHLLLAFWHGLYKKEDIIHFVWENRGGCVSESSYYK LINQMRNDFSSIGLQSSDIVTRPRVGVSLSVAIEPIKKITSLKVSDENVKGTTTRENIFYKNKRHSVFVVLTGAILLALL YGVFTIYKAPVRNSPDSFFTYLGEYNDYAIYKTKEDKVTLSEVVFAFNSLKIKIYRQNGRHLYYIREPNMNIFLQCLNPV EMAVPKCITVKERY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29399; Mature: 29399
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDAVTFRIVMNETIFLLDKRVVFDSTKMTLSHGNEIIRISEAETHLLLAFWHGLYKKED CCCEEEEEEEECCEEEEEECEEEECCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCC IIHFVWENRGGCVSESSYYKLINQMRNDFSSIGLQSSDIVTRPRVGVSLSVAIEPIKKIT EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEEHHHHHHHH SLKVSDENVKGTTTRENIFYKNKRHSVFVVLTGAILLALLYGVFTIYKAPVRNSPDSFFT EEEECCCCCCCCCCCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHH YLGEYNDYAIYKTKEDKVTLSEVVFAFNSLKIKIYRQNGRHLYYIREPNMNIFLQCLNPV HHCCCCCEEEEEECCCCEEHHHHHHHHCCEEEEEEEECCCEEEEEECCCCEEEEEECCHH EMAVPKCITVKERY HHHCCCEEEEECCC >Mature Secondary Structure MMDAVTFRIVMNETIFLLDKRVVFDSTKMTLSHGNEIIRISEAETHLLLAFWHGLYKKED CCCEEEEEEEECCEEEEEECEEEECCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCC IIHFVWENRGGCVSESSYYKLINQMRNDFSSIGLQSSDIVTRPRVGVSLSVAIEPIKKIT EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEEHHHHHHHH SLKVSDENVKGTTTRENIFYKNKRHSVFVVLTGAILLALLYGVFTIYKAPVRNSPDSFFT EEEECCCCCCCCCCCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHH YLGEYNDYAIYKTKEDKVTLSEVVFAFNSLKIKIYRQNGRHLYYIREPNMNIFLQCLNPV HHCCCCCEEEEEECCCCEEHHHHHHHHCCEEEEEEEECCCEEEEEECCCCEEEEEECCHH EMAVPKCITVKERY HHHCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA