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The map label for this gene is rhsE [H]

Identifier: 16763675

GI number: 16763675

Start: 337095

End: 337835

Strand: Direct

Name: rhsE [H]

Synonym: STM0292

Alternate gene names: 16763675

Gene position: 337095-337835 (Clockwise)

Preceding gene: 16763674

Following gene: 16763676

Centisome position: 6.94

GC content: 52.5

Gene sequence:

>741_bases
GTGCAGCAGCAGGGCTGGCGGACATATCTGTACGATGCGGAACAGCCGTACACGCCGGTGGCGAGCGTGACGGGAAAGGG
AGAAAGCAGGCAGGTGTGGTATTACCACACGGACGTGACGGGCACGCCGCAGGAGGTGACGGCGGCGGACGGAACGCTGG
TGTGGGCGGGGTATATCAAGGGGTTTGGAGAAAATGCGGCGGACATCAGCAACAGCGGGGCGTACTTTCACCAGCCGCTG
CGGCTGCCGGGGCAGTATTTTGACGACGAGACAGGGCTGCATTACAATCTGTTCAGATATTATGCACCGGAGTGTGGACG
GTTCGTCAGTCAGGATCCGATTGGGCTGGCGGGGGGGCTGAATCTTTACCAGTATGCGCCTAATCCGATTAGATGGATCG
ATCCTTTAGGACTTGCTATCCTGGAGCATCAATCTAATTTTGATGCGGCAAGGAGAACCGGATTTGAAAATGCGGGTATG
ACAAACCCTGAGGATGTCACTTTCTCGAAAGTCGATCCCAAAACTGGTACTGTTGTTGAGTTTAAAGGTCCAAATGGGGC
TAAAGTTGCTTATGATGCACCTCATGCAGATATGGATGTGACAGCAGGGCATGATAAACCACATGTTGGTTGGCAATCCG
CAGGAAAAAGAGGTTCCGGAGGAGCTAATAGAGGTAATATTACTTATGATGGCCCACAACATCCGCATCGCTCTGACTCT
AAGGGAGATGATAAATGTTAA

Upstream 100 bases:

>100_bases
CAGGCGGGTGAGCAAGGCGACGTACGGGCGGCACACGGGCCATACGGCGCGGAGCCGGACGGACTTTGTGTGGGAGGGGT
TCAGGCTGTTGCAGGAGAAC

Downstream 100 bases:

>100_bases
ATTCAAATATGTCTGAACTTAGAATCGAACTGGAGAATGCGATTAAAAATCTCGGTATTCATGATTATCGTGTCGATAAA
CCCGAACAAATCGTTTCTGA

Product: RHS-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MQQQGWRTYLYDAEQPYTPVASVTGKGESRQVWYYHTDVTGTPQEVTAADGTLVWAGYIKGFGENAADISNSGAYFHQPL
RLPGQYFDDETGLHYNLFRYYAPECGRFVSQDPIGLAGGLNLYQYAPNPIRWIDPLGLAILEHQSNFDAARRTGFENAGM
TNPEDVTFSKVDPKTGTVVEFKGPNGAKVAYDAPHADMDVTAGHDKPHVGWQSAGKRGSGGANRGNITYDGPQHPHRSDS
KGDDKC

Sequences:

>Translated_246_residues
MQQQGWRTYLYDAEQPYTPVASVTGKGESRQVWYYHTDVTGTPQEVTAADGTLVWAGYIKGFGENAADISNSGAYFHQPL
RLPGQYFDDETGLHYNLFRYYAPECGRFVSQDPIGLAGGLNLYQYAPNPIRWIDPLGLAILEHQSNFDAARRTGFENAGM
TNPEDVTFSKVDPKTGTVVEFKGPNGAKVAYDAPHADMDVTAGHDKPHVGWQSAGKRGSGGANRGNITYDGPQHPHRSDS
KGDDKC
>Mature_246_residues
MQQQGWRTYLYDAEQPYTPVASVTGKGESRQVWYYHTDVTGTPQEVTAADGTLVWAGYIKGFGENAADISNSGAYFHQPL
RLPGQYFDDETGLHYNLFRYYAPECGRFVSQDPIGLAGGLNLYQYAPNPIRWIDPLGLAILEHQSNFDAARRTGFENAGM
TNPEDVTFSKVDPKTGTVVEFKGPNGAKVAYDAPHADMDVTAGHDKPHVGWQSAGKRGSGGANRGNITYDGPQHPHRSDS
KGDDKC

Specific function: Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell [H]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RHS family [H]

Homologues:

Organism=Escherichia coli, GI1786917, Length=114, Percent_Identity=45.6140350877193, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786706, Length=110, Percent_Identity=43.6363636363636, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI48994942, Length=114, Percent_Identity=44.7368421052632, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1790020, Length=113, Percent_Identity=43.3628318584071, Blast_Score=97, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001826
- InterPro:   IPR022385
- InterPro:   IPR006530 [H]

Pfam domain/function: PF03527 RHS; PF05593 RHS_repeat [H]

EC number: NA

Molecular weight: Translated: 26994; Mature: 26994

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS00995 TCP1_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQQGWRTYLYDAEQPYTPVASVTGKGESRQVWYYHTDVTGTPQEVTAADGTLVWAGYIK
CCCCCCEEEEECCCCCCCCCEEECCCCCCCEEEEEECCCCCCCHHEECCCCCEEEEEEHH
GFGENAADISNSGAYFHQPLRLPGQYFDDETGLHYNLFRYYAPECGRFVSQDPIGLAGGL
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEHHEECCCHHHHHCCCCCCCEECCC
NLYQYAPNPIRWIDPLGLAILEHQSNFDAARRTGFENAGMTNPEDVTFSKVDPKTGTVVE
EEEEECCCCCEEECCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEE
FKGPNGAKVAYDAPHADMDVTAGHDKPHVGWQSAGKRGSGGANRGNITYDGPQHPHRSDS
EECCCCCEEEEECCCCCCEEECCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCC
KGDDKC
CCCCCC
>Mature Secondary Structure
MQQQGWRTYLYDAEQPYTPVASVTGKGESRQVWYYHTDVTGTPQEVTAADGTLVWAGYIK
CCCCCCEEEEECCCCCCCCCEEECCCCCCCEEEEEECCCCCCCHHEECCCCCEEEEEEHH
GFGENAADISNSGAYFHQPLRLPGQYFDDETGLHYNLFRYYAPECGRFVSQDPIGLAGGL
CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEHHEECCCHHHHHCCCCCCCEECCC
NLYQYAPNPIRWIDPLGLAILEHQSNFDAARRTGFENAGMTNPEDVTFSKVDPKTGTVVE
EEEEECCCCCEEECCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEE
FKGPNGAKVAYDAPHADMDVTAGHDKPHVGWQSAGKRGSGGANRGNITYDGPQHPHRSDS
EECCCCCEEEEECCCCCCEEECCCCCCCCCHHHCCCCCCCCCCCCCEEECCCCCCCCCCC
KGDDKC
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1766878; 7934896 [H]