| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16763673
Identifier: 16763673
GI number: 16763673
Start: 332086
End: 332532
Strand: Direct
Name: 16763673
Synonym: STM0290
Alternate gene names: NA
Gene position: 332086-332532 (Clockwise)
Preceding gene: 16763672
Following gene: 16763674
Centisome position: 6.84
GC content: 51.45
Gene sequence:
>447_bases ATGGATCGACCATACCGCATACAGGAAGGGTGTTTTGTCCTGCCTGAAACATTTACGGATCGCAGCGTCAATATTTTTAT CCTGGAGGGCAATGAACGAACATCGCCCAGCCTGAATATTTCCCGCGATACGCTAAAACCTGATGAAGACCTGCCCGCCT ATATTGACCGCCAGATTGCACTGATGAAAAAAAATCTCGGTCAGCACCGGGTATTGTCGCGAGCGCCTGCACAGGCAGGA ACGGGCAATGATGCCCTTATGGGGGAACAAATTGCCGCCACCCATAAATCCGGGAAAACGGAAGTGTACCAGCGTCAGGC CGGGTTTATTGCAACCCCTGGCAAGGTACTGGTCTTCACCCTGACCAGTCCCCGTCCTTTTGATGATAAAGCAGACCTAC TCTGGAACACCTGGCTGGCAGGCTTTCAGCCGGATAAAAACGAATAA
Upstream 100 bases:
>100_bases AAGGTATTGATATGAACCCGGATGGCGGCACAGCCGTAACCGCCGATGATATTGCCCCCCTTCTCACCTCTGAGTGATCT GAATTAAACCTGGAGTTCTC
Downstream 100 bases:
>100_bases TCACACGGAGGTGTGACCATGTATGAAGCAGCCCGTGTGGATGATCCTATCTACCACACCAGCGCGCTCGCCGGGTTTCT TATCGGCGCTATCATCGGCA
Product: cytoplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MDRPYRIQEGCFVLPETFTDRSVNIFILEGNERTSPSLNISRDTLKPDEDLPAYIDRQIALMKKNLGQHRVLSRAPAQAG TGNDALMGEQIAATHKSGKTEVYQRQAGFIATPGKVLVFTLTSPRPFDDKADLLWNTWLAGFQPDKNE
Sequences:
>Translated_148_residues MDRPYRIQEGCFVLPETFTDRSVNIFILEGNERTSPSLNISRDTLKPDEDLPAYIDRQIALMKKNLGQHRVLSRAPAQAG TGNDALMGEQIAATHKSGKTEVYQRQAGFIATPGKVLVFTLTSPRPFDDKADLLWNTWLAGFQPDKNE >Mature_148_residues MDRPYRIQEGCFVLPETFTDRSVNIFILEGNERTSPSLNISRDTLKPDEDLPAYIDRQIALMKKNLGQHRVLSRAPAQAG TGNDALMGEQIAATHKSGKTEVYQRQAGFIATPGKVLVFTLTSPRPFDDKADLLWNTWLAGFQPDKNE
Specific function: Unknown
COG id: COG5435
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16592; Mature: 16592
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRPYRIQEGCFVLPETFTDRSVNIFILEGNERTSPSLNISRDTLKPDEDLPAYIDRQIA CCCCEECCCCEEECCCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHH LMKKNLGQHRVLSRAPAQAGTGNDALMGEQIAATHKSGKTEVYQRQAGFIATPGKVLVFT HHHHCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHCCCEEECCCEEEEEE LTSPRPFDDKADLLWNTWLAGFQPDKNE ECCCCCCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDRPYRIQEGCFVLPETFTDRSVNIFILEGNERTSPSLNISRDTLKPDEDLPAYIDRQIA CCCCEECCCCEEECCCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHH LMKKNLGQHRVLSRAPAQAGTGNDALMGEQIAATHKSGKTEVYQRQAGFIATPGKVLVFT HHHHCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHCCCEEECCCEEEEEE LTSPRPFDDKADLLWNTWLAGFQPDKNE ECCCCCCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA