Click here to switch to the map view.

The map label for this gene is 16763672

Identifier: 16763672

GI number: 16763672

Start: 329873

End: 332062

Strand: Direct

Name: 16763672

Synonym: STM0289

Alternate gene names: NA

Gene position: 329873-332062 (Clockwise)

Preceding gene: 16763671

Following gene: 16763673

Centisome position: 6.79

GC content: 56.85

Gene sequence:

>2190_bases
ATGAGTTTTGTATCCACAAATAATAAATCCGGTATGGGAGGGCTGACGACAACCACGCCGCCGATAACCGGAGAAAGTGG
CGGTGTCACCGCAGATTCAGTCGCCGGAAGCGTGGCAGATGCGGCGGAATCCGCCGTGGAACAGGCTGCGGGATCGCTAT
TTGGCGCATTGCCGGAGCCATCAGGACTGGTGAAAGCCGCGGTAGCAGCGGCGCAGGCTGCCGCCGCCGCAGGTATGGCG
CAGGATGCGGTATCGGCCATCGTCTCTGCTGTTGCAGGCGGGCCGGGGGCGCATAATGTGACGGTCAGCGGCAGCGCCGT
ACCGCCGGGCGCATTACTGTTCGCCAGCCTGGACGGCGGCGAAACATTAAGTGAACTGTTCAGCTATGTGGTACAGCTAA
AAACGCCCGACACCCTGAATCTGGGCTATGTCTCCCCGGCGGCCAACCTGCCGCTCAAACCGATGGTGGGCAAAGATCTG
TGCGTCAACATCGAACTGGATGGTGGCGGTAAACGACATATCAGCGGGCTGGTCACGGCGGCGCGGGTGGTGGGCCATGA
AGGGCGTTCGGTTACCTATGAGCTGCGTATGGAGCCGTGGGTAAAACTGCTGACCCATACCAGCGACTACAAAGCATTCC
AGAATAAAACCGTGGTGGATATTCTGGATGAGGTTCTGGCGGAATATCCCTACCCGGTGGAAAAGCGGCTGGTGGAAAGC
TACCCGGTACGCACCTGGCAGGTGCAGTACGGTGAAACTGATTTTGATTTTCTTCAGCGACTGATGCAGGAGTGGGGCAT
CTACTGGTGGTTTGAGCACAGCGAGGACAGCCACACGCTGGTGCTGGCGGATGCCATCAGCGCCCACAAAGCATGTCCGG
ACTCGCCGCTGGTCGAGTGGCACCAGGAAGGGCTGAAGCTGGACAAGGAGTTTATCCACACTATCACGGCAAACGAGAGC
CTGCGGACTGGACAGTGGGTGCTGGATGATTTCGATTTTACGAAGCCACGTTCATTGCTGGCAAACACCGTGGCAAACCC
GCGTGAAACCGGTCATGCCACCTACGAGCATTATGAGTGGCCGGGAGACTACTTCGACAAGAGTGAAGGCGAGATGCTGA
CGCGCATTCGTATGGAAGCGCAGCGCAGCCCCGGCAGTCGGGTGCTGGGGGGAGGGAATATCCGCACACTCATGACCGGT
TATACCTTCACGCTGGAAAACTATCCCACCGCCGAAGTCAATCAGGAATATCTGCTGATGCAGACCTTGCTGTTTGTGCA
GGACAACGCGCAGCACAGCGGGCAGGACCAGCACTTTACCTTTTCCACCCGTTTTGAACTGCACCCCACCCGCGAGGTGT
TCCGCCCGCAGCGGACGGTGAGCAAACCCCACACCAAAGGGCCGCAGAGCGCCATCGTCACCGGCCCGGCGGGCCAGGAA
ATCTGGACGGATCAGTACGGGCGGGTAAAGGTACAGTTTGGTTGGGATCGCTACGGCAAAATGGATGAAAACAGCTCCTG
CTGGATACGCGTCAGCTACCCGTGGGCGGGCAAAGGCTTCGGGATGATCCAGATCCCGCGTATCGGCCAGGAAGTGCTGG
TGGATTTCAAAAACGGCGATCCGGATCTGCCGATCATCGTGGGGCGTACCTACAACCAGGACACCATGCCGCCGTGGGGA
CTGCCGGGAATGGCGTCGCAGAGCGGGATCTTCAGCCACTCGCTGTATGGCGGGCCAACGAACGGCAACATGCTGCGTTT
TGACGACAAAACGGGCGCGGAGGAAGTGAAGTTCCACGCGGAAAAAGATCTCAACACCACGGTGAAGAATAATGAAACGC
ATACGGTTATGGTGGATCGCACTAAAACCATTATTAAAAATGAAACCAACAGTATTGGTGAGGACAGAAACACCACGGTA
ACGAAGAATGACGGCCTTTCCGTAAAACTGGCGCAGACGATCAATATCGGCACCACTTATCGTTTAGATGTTGGCGATCA
ATTCACGCTTCGCTGCGGCAATGCGGCGCTTGTTTTACATAAGGACGGCTCCATTGAGTTTTGTGGCAAGCAACTGATGT
TACATACCAGCGATGTCATGCAACTGATTGGTAAAGGTATTGATATGAACCCGGATGGCGGCACAGCCGTAACCGCCGAT
GATATTGCCCCCCTTCTCACCTCTGAGTGA

Upstream 100 bases:

>100_bases
ATATTTAAATATAACAGGCTGGTTGCATTATAAAGTGCGGGGCACTGTTTCCTGACGGTGAGTCTATTTATTTTAATCCG
GTATTAAAGGAGTCACTACC

Downstream 100 bases:

>100_bases
TCTGAATTAAACCTGGAGTTCTCATGGATCGACCATACCGCATACAGGAAGGGTGTTTTGTCCTGCCTGAAACATTTACG
GATCGCAGCGTCAATATTTT

Product: cytoplasmic protein

Products: NA

Alternate protein names: Rhs Element Vgr Protein; Rhs-Family Protein; VgrG Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; Vgr Protein; VgrG Family T6SS G; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Rhs Protein; Rhs Element Vgr Family; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Rhs/Vgr-Family Protein; RHS Accessory Genetic Element; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Vgr Family Type VI Secretion System; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein

Number of amino acids: Translated: 729; Mature: 728

Protein sequence:

>729_residues
MSFVSTNNKSGMGGLTTTTPPITGESGGVTADSVAGSVADAAESAVEQAAGSLFGALPEPSGLVKAAVAAAQAAAAAGMA
QDAVSAIVSAVAGGPGAHNVTVSGSAVPPGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDL
CVNIELDGGGKRHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVES
YPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVEWHQEGLKLDKEFIHTITANES
LRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTG
YTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQE
IWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWG
LPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTV
TKNDGLSVKLAQTINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTAD
DIAPLLTSE

Sequences:

>Translated_729_residues
MSFVSTNNKSGMGGLTTTTPPITGESGGVTADSVAGSVADAAESAVEQAAGSLFGALPEPSGLVKAAVAAAQAAAAAGMA
QDAVSAIVSAVAGGPGAHNVTVSGSAVPPGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDL
CVNIELDGGGKRHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVES
YPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVEWHQEGLKLDKEFIHTITANES
LRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTG
YTFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQE
IWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWG
LPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTV
TKNDGLSVKLAQTINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTAD
DIAPLLTSE
>Mature_728_residues
SFVSTNNKSGMGGLTTTTPPITGESGGVTADSVAGSVADAAESAVEQAAGSLFGALPEPSGLVKAAVAAAQAAAAAGMAQ
DAVSAIVSAVAGGPGAHNVTVSGSAVPPGALLFASLDGGETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLC
VNIELDGGGKRHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVESY
PVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVEWHQEGLKLDKEFIHTITANESL
RTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEWPGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGY
TFTLENYPTAEVNQEYLLMQTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQEI
WTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWGL
PGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVT
KNDGLSVKLAQTINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTADD
IAPLLTSE

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79579; Mature: 79448

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFVSTNNKSGMGGLTTTTPPITGESGGVTADSVAGSVADAAESAVEQAAGSLFGALPEP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHCHHHHHHHHHHHHHHHHHHCCCCCC
SGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGALLFASLDGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCC
ETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHISGLVTA
HHHHHHHHHHEEECCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHH
ARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVES
HHHHCCCCCEEEEEEECCHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH
YPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVEW
CCCEEEEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCEEEEEECHHHHCCCCCCHHHHH
HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEW
HHHHHHHCHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCEECCC
PGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLM
CCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCEEEEEEEEEEEECCCCCCCCCHHHHHH
QTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQE
HHHHHHCCCCCCCCCCCEEEEEEEEEECCCHHHHCCHHHCCCCCCCCCCCEEEECCCCCC
IWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGD
HHCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCEEEEEECCCC
PDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHA
CCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCHHHHEEEC
EKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTY
CCCCCCCCCCCCEEEEEEECCHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEEEECCEEE
RLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTAD
EEECCCEEEEEECCEEEEEEECCCCEECCHHHEEEHHHHHHHHHCCCCCCCCCCCEEEHH
DIAPLLTSE
HCCHHHCCC
>Mature Secondary Structure 
SFVSTNNKSGMGGLTTTTPPITGESGGVTADSVAGSVADAAESAVEQAAGSLFGALPEP
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHCHHHHHHHHHHHHHHHHHHCCCCCC
SGLVKAAVAAAQAAAAAGMAQDAVSAIVSAVAGGPGAHNVTVSGSAVPPGALLFASLDGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCC
ETLSELFSYVVQLKTPDTLNLGYVSPAANLPLKPMVGKDLCVNIELDGGGKRHISGLVTA
HHHHHHHHHHEEECCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHH
ARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVES
HHHHCCCCCEEEEEEECCHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH
YPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISAHKACPDSPLVEW
CCCEEEEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCEEEEEECHHHHCCCCCCHHHHH
HQEGLKLDKEFIHTITANESLRTGQWVLDDFDFTKPRSLLANTVANPRETGHATYEHYEW
HHHHHHHCHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCEECCC
PGDYFDKSEGEMLTRIRMEAQRSPGSRVLGGGNIRTLMTGYTFTLENYPTAEVNQEYLLM
CCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCEEEEEEEEEEEECCCCCCCCCHHHHHH
QTLLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQE
HHHHHHCCCCCCCCCCCEEEEEEEEEECCCHHHHCCHHHCCCCCCCCCCCEEEECCCCCC
IWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGD
HHCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCEEEEEECCCC
PDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHA
CCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCHHHHEEEC
EKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTTY
CCCCCCCCCCCCEEEEEEECCHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEEEECCEEE
RLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTAD
EEECCCEEEEEECCEEEEEEECCCCEECCHHHEEEHHHHHHHHHCCCCCCCCCCCEEEHH
DIAPLLTSE
HCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA