| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16763670
Identifier: 16763670
GI number: 16763670
Start: 328515
End: 328931
Strand: Direct
Name: 16763670
Synonym: STM0287
Alternate gene names: NA
Gene position: 328515-328931 (Clockwise)
Preceding gene: 16763669
Following gene: 16763671
Centisome position: 6.76
GC content: 47.72
Gene sequence:
>417_bases GTGAAAAAGTACGCTGTAGAGGTTCTGTTTATGTCTGCCTGTGCAGGAATGTTCCTGCCCGTATTTGCCTGGGGCGGAAC AGATGTAAACATTGATAACCCGCTGGCGGAGTGTGTGGATATCCATCCCGTTCATCGTCAGGAAATGGATAACCTTACCA TTCTGAAAACAACGGTCACACTGAAAAAAAGCACCGGTGAATGTGGCTGTTTCTCAACATTAATCAACTATACCAGCTTA CTGGCGCAGGATGTTGAGGGTTACGGACGCGGAAGTGCATATTCCCTTCAGGAGGGGAATATCTCACTGGCGAAGATGCA GGGACGTTATCCTTTCAGCTTTGTATTATCGGTGGATAACCAGTCTGTACGGGATCAGAAGCTGGCGCTAATGATACGTT GTACACCACCGCTGTAA
Upstream 100 bases:
>100_bases AGGCAACACCGGGGCAAGGCTGGTTCTGGCAGCAGAACAGTGAAGGGCGGTATGTGGATGCGCTGCGGTTGGTGGATGAA AAAAATAGAGGTCAGATGCT
Downstream 100 bases:
>100_bases TACACAGAATAGTCAGGGAGAAGATGATGGCAGTAAGACTGACTTTTGACGGGCAAAAGCTGACATGGCCTGGTATCGGG ATATTTAAGGCGACCACGGG
Product: periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MKKYAVEVLFMSACAGMFLPVFAWGGTDVNIDNPLAECVDIHPVHRQEMDNLTILKTTVTLKKSTGECGCFSTLINYTSL LAQDVEGYGRGSAYSLQEGNISLAKMQGRYPFSFVLSVDNQSVRDQKLALMIRCTPPL
Sequences:
>Translated_138_residues MKKYAVEVLFMSACAGMFLPVFAWGGTDVNIDNPLAECVDIHPVHRQEMDNLTILKTTVTLKKSTGECGCFSTLINYTSL LAQDVEGYGRGSAYSLQEGNISLAKMQGRYPFSFVLSVDNQSVRDQKLALMIRCTPPL >Mature_138_residues MKKYAVEVLFMSACAGMFLPVFAWGGTDVNIDNPLAECVDIHPVHRQEMDNLTILKTTVTLKKSTGECGCFSTLINYTSL LAQDVEGYGRGSAYSLQEGNISLAKMQGRYPFSFVLSVDNQSVRDQKLALMIRCTPPL
Specific function: Unknown
COG id: COG4893
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15233; Mature: 15233
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYAVEVLFMSACAGMFLPVFAWGGTDVNIDNPLAECVDIHPVHRQEMDNLTILKTTVT CCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHCCCCCCHHCCCCEEEEEEEEE LKKSTGECGCFSTLINYTSLLAQDVEGYGRGSAYSLQEGNISLAKMQGRYPFSFVLSVDN EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCEEEEEEECC QSVRDQKLALMIRCTPPL CCCCCCEEEEEEEECCCC >Mature Secondary Structure MKKYAVEVLFMSACAGMFLPVFAWGGTDVNIDNPLAECVDIHPVHRQEMDNLTILKTTVT CCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHCCCCCCHHCCCCEEEEEEEEE LKKSTGECGCFSTLINYTSLLAQDVEGYGRGSAYSLQEGNISLAKMQGRYPFSFVLSVDN EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCEEEEEEECC QSVRDQKLALMIRCTPPL CCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA