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The map label for this gene is yaeR [H]

Identifier: 16763625

GI number: 16763625

Start: 278219

End: 278608

Strand: Direct

Name: yaeR [H]

Synonym: STM0235

Alternate gene names: 16763625

Gene position: 278219-278608 (Clockwise)

Preceding gene: 16763624

Following gene: 16763626

Centisome position: 5.73

GC content: 52.31

Gene sequence:

>390_bases
ATGCTGGGATTAAAACAGGTTCATCACATCGCGATCATTGCGACAGACTATGCGGTGAGCAAGGCGTTTTATTGCGATAT
TCTGGGGTTCGATCTGCTAAGCGAAGTCTGGCGGGAAGAGCGTGACTCGTGGAAGGGCGATTTGGCGCTAAACGGGCAGT
ATGTGATTGAGCTTTTCTCTTTTCCCTTCCCTCCGGCGCGTCCAAGCCGACCTGAAGCCTGCGGCCTGCGCCATCTGGCT
TTCAGCGTGGAAAATGTGGAAAACGCCGTTGCGCATCTGGAAAAGCATCAGGTTAAGTGCGAACCGATACGCATCGATCC
GTATACCGGGAAGCGCTTTACTTTTTTCAACGATCCGGACGGTTTACCGCTTGAGCTGTATGAGCAGTAA

Upstream 100 bases:

>100_bases
GAAGACGGGGTGTACCAGGTACGAGTCTTAAAACACGCCTGCTAGCTTGCCTGACGGGAATGTGACGAGTAACGTACTGA
TAATCAATAAAGGAGACGCT

Downstream 100 bases:

>100_bases
GGCTTGTCATTAAGACGCTCGCCAGGTAACGTTGCCGGGCTAAGTCACTATAAGCATGGATCATGACCACTCTCACGTTG
AATACCTCGTTACTCTCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MLGLKQVHHIAIIATDYAVSKAFYCDILGFDLLSEVWREERDSWKGDLALNGQYVIELFSFPFPPARPSRPEACGLRHLA
FSVENVENAVAHLEKHQVKCEPIRIDPYTGKRFTFFNDPDGLPLELYEQ

Sequences:

>Translated_129_residues
MLGLKQVHHIAIIATDYAVSKAFYCDILGFDLLSEVWREERDSWKGDLALNGQYVIELFSFPFPPARPSRPEACGLRHLA
FSVENVENAVAHLEKHQVKCEPIRIDPYTGKRFTFFNDPDGLPLELYEQ
>Mature_129_residues
MLGLKQVHHIAIIATDYAVSKAFYCDILGFDLLSEVWREERDSWKGDLALNGQYVIELFSFPFPPARPSRPEACGLRHLA
FSVENVENAVAHLEKHQVKCEPIRIDPYTGKRFTFFNDPDGLPLELYEQ

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywkD [H]

Homologues:

Organism=Escherichia coli, GI87081697, Length=129, Percent_Identity=88.3720930232558, Blast_Score=242, Evalue=5e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 14809; Mature: 14809

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGLKQVHHIAIIATDYAVSKAFYCDILGFDLLSEVWREERDSWKGDLALNGQYVIELFS
CCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEC
FPFPPARPSRPEACGLRHLAFSVENVENAVAHLEKHQVKCEPIRIDPYTGKRFTFFNDPD
CCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCCC
GLPLELYEQ
CCCEEEECC
>Mature Secondary Structure
MLGLKQVHHIAIIATDYAVSKAFYCDILGFDLLSEVWREERDSWKGDLALNGQYVIELFS
CCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEEC
FPFPPARPSRPEACGLRHLAFSVENVENAVAHLEKHQVKCEPIRIDPYTGKRFTFFNDPD
CCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCCC
GLPLELYEQ
CCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9723924; 9278503 [H]