Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
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Accession | NC_003197 |
Length | 4,857,432 |
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The map label for this gene is yajQ [C]
Identifier: 161353609
GI number: 161353609
Start: 487817
End: 488308
Strand: Direct
Name: yajQ [C]
Synonym: STM0435
Alternate gene names: 161353609
Gene position: 487817-488308 (Clockwise)
Preceding gene: 16763812
Following gene: 16763818
Centisome position: 10.04
GC content: 51.42
Gene sequence:
>492_bases ATGCCATCTTTCGATATTGTTTCTGAAGTTGATCTGCAGGAAGCGCGTAACGGTGTGGATAACGCGGTTCGCGAGGTTGA GTCTCGTTTTGACTTCCGTGGCGTAGAGGCGACTATTGAACTGAACGATGCCAATAAAACCATCAAGGTGCTGAGCGAGT CCGATTTCCAGGTCAATCAGTTGCTCGATATTCTGCGCGCCAAGCTGCTTAAACGCGGTATTGAAGGCGCTTCGCTGGAT GTACCGGACGAGTTCGTGCATAGCGGTAAAACCTGGTATGTGGAAGCGAAGCTGAAGCAGGGCATTGAAAGCGCCGTGCA GAAGAAAATCGTCAAGCTGATTAAAGACAGCAAACTGAAGGTGCAGGCGCAAATTCAGGGGGAAGAGATTCGCGTGACGG GCAAATCACGTGACGATCTGCAATCGGTAATGGCGCTGGTTCGCGGCGGCGATTTGGGCCAGCCGTTCCAGTTCAAAAAC TTCCGCGATTAA
Upstream 100 bases:
>100_bases CAGGTGTTATGGCGCTAATTATAGCGTCATCAGCTAAGCTTCTCGTTAAGCCTCGTTGCAGGTATTATGCAACGCAACGA AAATGAAGGGAGAAGAAAAG
Downstream 100 bases:
>100_bases GTTGTTATGCCGGATAGAGCCTCGCCGCCATCCGGCAATGCAGTATTCATCCTTTGCTGATAAGCTGTTCAACTTCAAAG CGATTGGTCACTTTGCTGTC
Product: nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MPSFDIVSEVDLQEARNGVDNAVREVESRFDFRGVEATIELNDANKTIKVLSESDFQVNQLLDILRAKLLKRGIEGASLD VPDEFVHSGKTWYVEAKLKQGIESAVQKKIVKLIKDSKLKVQAQIQGEEIRVTGKSRDDLQSVMALVRGGDLGQPFQFKN FRD
Sequences:
>Translated_163_residues MPSFDIVSEVDLQEARNGVDNAVREVESRFDFRGVEATIELNDANKTIKVLSESDFQVNQLLDILRAKLLKRGIEGASLD VPDEFVHSGKTWYVEAKLKQGIESAVQKKIVKLIKDSKLKVQAQIQGEEIRVTGKSRDDLQSVMALVRGGDLGQPFQFKN FRD >Mature_162_residues PSFDIVSEVDLQEARNGVDNAVREVESRFDFRGVEATIELNDANKTIKVLSESDFQVNQLLDILRAKLLKRGIEGASLDV PDEFVHSGKTWYVEAKLKQGIESAVQKKIVKLIKDSKLKVQAQIQGEEIRVTGKSRDDLQSVMALVRGGDLGQPFQFKNF RD
Specific function: Unknown
COG id: COG1666
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0234 family [H]
Homologues:
Organism=Escherichia coli, GI87081737, Length=163, Percent_Identity=90.1840490797546, Blast_Score=299, Evalue=5e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007551 [H]
Pfam domain/function: PF04461 DUF520 [H]
EC number: NA
Molecular weight: Translated: 18319; Mature: 18188
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSFDIVSEVDLQEARNGVDNAVREVESRFDFRGVEATIELNDANKTIKVLSESDFQVNQ CCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCCCHHH LLDILRAKLLKRGIEGASLDVPDEFVHSGKTWYVEAKLKQGIESAVQKKIVKLIKDSKLK HHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEE VQAQIQGEEIRVTGKSRDDLQSVMALVRGGDLGQPFQFKNFRD EEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PSFDIVSEVDLQEARNGVDNAVREVESRFDFRGVEATIELNDANKTIKVLSESDFQVNQ CCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECCCCCCCHHH LLDILRAKLLKRGIEGASLDVPDEFVHSGKTWYVEAKLKQGIESAVQKKIVKLIKDSKLK HHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCEE VQAQIQGEEIRVTGKSRDDLQSVMALVRGGDLGQPFQFKNFRD EEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA