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The map label for this gene is tnpA [H]

Identifier: 218931037

GI number: 218931037

Start: 4569065

End: 4569550

Strand: Direct

Name: tnpA [H]

Synonym: YPO4051

Alternate gene names: 218931037

Gene position: 4569065-4569550 (Clockwise)

Preceding gene: 218931035

Following gene: 218931042

Centisome position: 98.18

GC content: 45.27

Gene sequence:

>486_bases
CTGGTTGATTATCAGGCTACCTTGAGCCTAGCACAGCAATGGGGTGGTGGAGAAGTTGCTTCTGCTGACGGTATGCGTTT
TGTTACGCCAGTAAAAACGATTAACGCCGGACCCAATCGAAAATACTTTGGCTCCAACCGGGGAATTACCTGGTACAACT
TTATTTCCGATCAGTTTTCTGGTTTTCACGGCATTGTTGTACCGGGCACCTTGAGGGACTCAATTTTTATTCTGGAGGGT
TTACTCGAACAGCAAACGGGGTTGAATCCACAGGAAATTATGACTGATACAGCAGGTGCCAGCGATTTGATATTCGGTCT
ATTCTGGCTGTTGGGATACCCGTTTTCTCCCCGTCTGGCGGACGCCGGAGATGCCGTTTTCTGGCGAGTGGATAAAAATG
CGATAATCAATCCTTCAAATATTTATACTTTTGCTGCCAAAGTAGGGTTCAATTTATACAAAAACGCTAATCTGGCAACA
ATATAG

Upstream 100 bases:

>100_bases
CCACATTCTGTTTATACTTGGGCTCCGTTTGGGAAACGGAAAATATGGTACGTTAAGGTGATTTTTTGTACTGGGGTTGT
ACGCCGGAACCGCATGACCC

Downstream 100 bases:

>100_bases
CTCTCCTCAAGAACCTGTCGCAGAAAACAGGCCGCTATCTCGCAATATATGGCCATTACCCCGGCGGCGGGTGAAACCAC
TGCGGTCAAAGAATTCAAGA

Product: transposase (partial)

Products: NA

Alternate protein names: Transposon Tn1000 transposase [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
LVDYQATLSLAQQWGGGEVASADGMRFVTPVKTINAGPNRKYFGSNRGITWYNFISDQFSGFHGIVVPGTLRDSIFILEG
LLEQQTGLNPQEIMTDTAGASDLIFGLFWLLGYPFSPRLADAGDAVFWRVDKNAIINPSNIYTFAAKVGFNLYKNANLAT
I

Sequences:

>Translated_161_residues
MVDYQATLSLAQQWGGGEVASADGMRFVTPVKTINAGPNRKYFGSNRGITWYNFISDQFSGFHGIVVPGTLRDSIFILEG
LLEQQTGLNPQEIMTDTAGASDLIFGLFWLLGYPFSPRLADAGDAVFWRVDKNAIINPSNIYTFAAKVGFNLYKNANLAT
I
>Mature_161_residues
MVDYQATLSLAQQWGGGEVASADGMRFVTPVKTINAGPNRKYFGSNRGITWYNFISDQFSGFHGIVVPGTLRDSIFILEG
LLEQQTGLNPQEIMTDTAGASDLIFGLFWLLGYPFSPRLADAGDAVFWRVDKNAIINPSNIYTFAAKVGFNLYKNANLAT
I

Specific function: Required for transposition of transposon Tn1000 [H]

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002513 [H]

Pfam domain/function: PF01526 Transposase_7 [H]

EC number: NA

Molecular weight: Translated: 17666; Mature: 17666

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDYQATLSLAQQWGGGEVASADGMRFVTPVKTINAGPNRKYFGSNRGITWYNFISDQFS
CCCHHHHHHHHHHCCCCCEECCCCEEEECCCEEECCCCCCCCCCCCCCEEEEEEHHHHHC
GFHGIVVPGTLRDSIFILEGLLEQQTGLNPQEIMTDTAGASDLIFGLFWLLGYPFSPRLA
CCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
DAGDAVFWRVDKNAIINPSNIYTFAAKVGFNLYKNANLATI
CCCCEEEEEECCCCEECCCHHEEEHHHHCCEEECCCCCCCC
>Mature Secondary Structure
MVDYQATLSLAQQWGGGEVASADGMRFVTPVKTINAGPNRKYFGSNRGITWYNFISDQFS
CCCHHHHHHHHHHCCCCCEECCCCEEEECCCEEECCCCCCCCCCCCCCEEEEEEHHHHHC
GFHGIVVPGTLRDSIFILEGLLEQQTGLNPQEIMTDTAGASDLIFGLFWLLGYPFSPRLA
CCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
DAGDAVFWRVDKNAIINPSNIYTFAAKVGFNLYKNANLATI
CCCCEEEEEECCCCEECCCHHEEEHHHHCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7612932; 8080658; 1709493 [H]