| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218931035
Identifier: 218931035
GI number: 218931035
Start: 4567870
End: 4568451
Strand: Direct
Name: 218931035
Synonym: YPO4049
Alternate gene names: NA
Gene position: 4567870-4568451 (Clockwise)
Preceding gene: 218931034
Following gene: 218931037
Centisome position: 98.16
GC content: 37.97
Gene sequence:
>582_bases ATGGAATGCTATCACCTTTCCAAGCAAGACAGTATGCTTTCATTAAAACAGGCGAAGGTATACATATCCGCTAAAATTGA AGAGCATGATAAAGTTATCGGCTATGTTATTGATGGAATAGCTGTAATTGTTGGCGGTTTACAGATGGTCGCCGGAAGTG GAATTCTCCTTGGCTCAATAGCTTCAGGAAATATTGTCGGTATCATCGTTGGTGCTCATTTGATATTAAATGGTGCAAGT AGTCTATCAGAAGGGGTTCAGCGGTTAAGAGGCAATAAAAATACTACCGGTTTTATGCAGGATGCTTATATGGGAACGGC TGAATTCTTTGGATTTGAAAGAAAAACCGGTATGTTGGCCTATTATGCGGCAGATTTAACTACGTCATTCTATGGTGTCA TTAAATTGTCATTAAAACCCGATGCGTGGAGATTGTATAAATATATTCCATCCGATTACTACCGAAAAATAAACAGCATG AGTAAGCTAGCACTTACCATACAAGGTGTTAAGGCTACAAATAAAATAAGAGTTATCGGTAGCACCTATCTGGATGATAA TTCAGAGTATGAAAGAAAATAG
Upstream 100 bases:
>100_bases ATTTGAGAATGATATCAAATAATTTACACAAAAAAACCTTACCTTTATACGGAACGCCAGAACAGACAACGATTGCAAGG AAGGGATAGACAACTTGAAA
Downstream 100 bases:
>100_bases ACAGCAAGGAGGATCATTCCTCCTTATTGGAAAGATATCTATATGACTTCCATGCTAAGTTCAGTGGCGTTATATAATAA GTCATATACAAGCCAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MECYHLSKQDSMLSLKQAKVYISAKIEEHDKVIGYVIDGIAVIVGGLQMVAGSGILLGSIASGNIVGIIVGAHLILNGAS SLSEGVQRLRGNKNTTGFMQDAYMGTAEFFGFERKTGMLAYYAADLTTSFYGVIKLSLKPDAWRLYKYIPSDYYRKINSM SKLALTIQGVKATNKIRVIGSTYLDDNSEYERK
Sequences:
>Translated_193_residues MECYHLSKQDSMLSLKQAKVYISAKIEEHDKVIGYVIDGIAVIVGGLQMVAGSGILLGSIASGNIVGIIVGAHLILNGAS SLSEGVQRLRGNKNTTGFMQDAYMGTAEFFGFERKTGMLAYYAADLTTSFYGVIKLSLKPDAWRLYKYIPSDYYRKINSM SKLALTIQGVKATNKIRVIGSTYLDDNSEYERK >Mature_193_residues MECYHLSKQDSMLSLKQAKVYISAKIEEHDKVIGYVIDGIAVIVGGLQMVAGSGILLGSIASGNIVGIIVGAHLILNGAS SLSEGVQRLRGNKNTTGFMQDAYMGTAEFFGFERKTGMLAYYAADLTTSFYGVIKLSLKPDAWRLYKYIPSDYYRKINSM SKLALTIQGVKATNKIRVIGSTYLDDNSEYERK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21202; Mature: 21202
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECYHLSKQDSMLSLKQAKVYISAKIEEHDKVIGYVIDGIAVIVGGLQMVAGSGILLGSI CCCCCCCCCCCHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC ASGNIVGIIVGAHLILNGASSLSEGVQRLRGNKNTTGFMQDAYMGTAEFFGFERKTGMLA CCCCEEEEEEEHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHCCCCCCCCEEE YYAADLTTSFYGVIKLSLKPDAWRLYKYIPSDYYRKINSMSKLALTIQGVKATNKIRVIG EEEHHHHHHEEEEEEEEECCCHHHHHHHCCHHHHHHHHHHHEEEEEEECCCCCCEEEEEE STYLDDNSEYERK EEECCCCCCCCCC >Mature Secondary Structure MECYHLSKQDSMLSLKQAKVYISAKIEEHDKVIGYVIDGIAVIVGGLQMVAGSGILLGSI CCCCCCCCCCCHHHHHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC ASGNIVGIIVGAHLILNGASSLSEGVQRLRGNKNTTGFMQDAYMGTAEFFGFERKTGMLA CCCCEEEEEEEHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHCCCCCCCCEEE YYAADLTTSFYGVIKLSLKPDAWRLYKYIPSDYYRKINSMSKLALTIQGVKATNKIRVIG EEEHHHHHHEEEEEEEEECCCHHHHHHHCCHHHHHHHHHHHEEEEEEECCCCCCEEEEEE STYLDDNSEYERK EEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA