| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930895
Identifier: 218930895
GI number: 218930895
Start: 4367358
End: 4367840
Strand: Direct
Name: 218930895
Synonym: YPO3894
Alternate gene names: NA
Gene position: 4367358-4367840 (Clockwise)
Preceding gene: 218930894
Following gene: 218930896
Centisome position: 93.85
GC content: 35.2
Gene sequence:
>483_bases TTGAGATTACCGGGGGCCGTAATGAAAGCAAAAAGTAAAAAAATCATCTGCGCGCTATTACTGCTTGGCAGCATTTTACT GGGTTATTTCTTCTGGTTATCGTTGCGCCCGGTGGAAATTGTCGCTATTCATAAGGACGGGAATTTTAGTGCTGTTTTAG TGAGAGATTTTCCGGTTACTGACAAAGGTAAAATAAATTGGTGGTTAGAAAATAAAAGTAGATTAAAAGACAAATACAAT ATTCCTAACCCTGCCCCTGATGGCTTTTTTTCTATCACTATTTGGGATTTTGGTGACGGCTATAAAGAGGAAGGAAAATA CGATAGACGATGTTTTGAGGATATGAAAACCAGTAAGAATTGTATAGATAAAAATTCACTTATGATTATAAGAAATAGCC AATATAACGTAATGTCTTTTACTTTGGACAGTGGCATATATCAGTTAAAAAATGGCGAAATCGTTAAAATGAAACGCGAA TAA
Upstream 100 bases:
>100_bases CAGTTAAAAAATGGCGAAATCGTTAAAATGAAACACGAATAAAATTTCGCCTCTTATGTAGTTTAGCCTCAAGCATTTAT GACCAATATGGAAGCCACAA
Downstream 100 bases:
>100_bases AATTTCGCCTCTTATGTAGTTTAGCCTCAAGCATTTATGACCAATATGGAAGCCACAATTGAGATTACCGGGGGCCGTAA TGAAAGCAAAAAGTAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MRLPGAVMKAKSKKIICALLLLGSILLGYFFWLSLRPVEIVAIHKDGNFSAVLVRDFPVTDKGKINWWLENKSRLKDKYN IPNPAPDGFFSITIWDFGDGYKEEGKYDRRCFEDMKTSKNCIDKNSLMIIRNSQYNVMSFTLDSGIYQLKNGEIVKMKRE
Sequences:
>Translated_160_residues MRLPGAVMKAKSKKIICALLLLGSILLGYFFWLSLRPVEIVAIHKDGNFSAVLVRDFPVTDKGKINWWLENKSRLKDKYN IPNPAPDGFFSITIWDFGDGYKEEGKYDRRCFEDMKTSKNCIDKNSLMIIRNSQYNVMSFTLDSGIYQLKNGEIVKMKRE >Mature_160_residues MRLPGAVMKAKSKKIICALLLLGSILLGYFFWLSLRPVEIVAIHKDGNFSAVLVRDFPVTDKGKINWWLENKSRLKDKYN IPNPAPDGFFSITIWDFGDGYKEEGKYDRRCFEDMKTSKNCIDKNSLMIIRNSQYNVMSFTLDSGIYQLKNGEIVKMKRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18498; Mature: 18498
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLPGAVMKAKSKKIICALLLLGSILLGYFFWLSLRPVEIVAIHKDGNFSAVLVRDFPVT CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEEECCCC DKGKINWWLENKSRLKDKYNIPNPAPDGFFSITIWDFGDGYKEEGKYDRRCFEDMKTSKN CCCCEEEEECCCHHCHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHC CIDKNSLMIIRNSQYNVMSFTLDSGIYQLKNGEIVKMKRE CCCCCCEEEEECCCCEEEEEEECCCEEEECCCCEEEEECC >Mature Secondary Structure MRLPGAVMKAKSKKIICALLLLGSILLGYFFWLSLRPVEIVAIHKDGNFSAVLVRDFPVT CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEEECCCC DKGKINWWLENKSRLKDKYNIPNPAPDGFFSITIWDFGDGYKEEGKYDRRCFEDMKTSKN CCCCEEEEECCCHHCHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHC CIDKNSLMIIRNSQYNVMSFTLDSGIYQLKNGEIVKMKRE CCCCCCEEEEECCCCEEEEEEECCCEEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA