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The map label for this gene is wzzE [H]

Identifier: 218930868

GI number: 218930868

Start: 4339034

End: 4340095

Strand: Reverse

Name: wzzE [H]

Synonym: YPO3865

Alternate gene names: 218930868

Gene position: 4340095-4339034 (Counterclockwise)

Preceding gene: 218930869

Following gene: 218930867

Centisome position: 93.26

GC content: 48.49

Gene sequence:

>1062_bases
ATGTCGACTGATAAAACAGGGTCTACCAATAATGAACCGTCTGTGGATAACGAATTAGATATCCGTGGTCTGTGTCGTAC
TCTATGGCGTGGCAAGGTATGGATTATCGGTATGGCCATTATTTTCGCTGCGATTGCACTGGGAGTCTCCTATCTGGTGA
AACAGCAGTGGAGTGCGACAGCCATTACTGACAAACCAACCGTCAACAATTTGGGGGGGTATTATTCGCAACAGCAGTTT
TTACGTAATCTTGATATCCGTCTCAATAGCGGGCTTGTCAGTGAACAGCCAGGCATCTCCGATGAAGCTTACGGTGAGTT
CATTACTCAGTTAGCGGCTTACGATACCCGTCGTGATTTCTGGCTACAAAGCGATTACTACAAGCAACGGCTTGAGGGAG
ACGCTAAGGCGGATGCGGCATTACTCGATGAGCTAGTGAATAACATTGTTTTCACGGCGCGTGATGATAAAAAAATCCCG
AATGACAGCATTAAATTGACGGCAGAAACGGCCAGTGATGCGAATAAGCTACTGCGTGGTTACATTGATTTTGCCAGTCA
ACGTGCGTCAAGCCACCTGAATGATGAAATTCAAGGCGCTTGGGCAGCGCGGACTCAATCAATGAAAGCGCAGGTTAAAC
GCCAGGAAGCGGTAGCTCAAGCAGTCTTTGATCGTGAAGTGGCGGCGGTTAAGCAAGCATTGAAAGTGGCTGGGCAACAA
GGTATTACCAGTAGCCAGACAGATACGCCAGCCGAGCAATTGGCAGATTCCAAGATGTTCATGCTAGGTAAGCCGATGCT
TGAAGCCCGTTTAGAAACATTACTGGCTACTGGCCCAAGTTTTGATATTGATTATGATCAAAACCGTGCCATGCTGGCAA
CATTGAACGTTGGTCCGACACTAGATGATAAATTCCAGACTTACCGCTACTTACGTACACCAGAAGACCCGGTTACCCGT
GATAGCCCACGTCGTGTGTTCCTGCTGATTATGTGGGGCGCTATCGGGGCATTAGTCGGTGCGGGTGTGGTATTGGTTCG
CCGCTCCAGTAAGGCACTGTGA

Upstream 100 bases:

>100_bases
CGCGTTTTATCAAACGTTTCAAGCGTCGGATGCGGCGGGCATCGAAAAATAAGCATGAATCTTAACCAGAGGCTTTTAGG
CAGTGATGAAACCAGAATCT

Downstream 100 bases:

>100_bases
CCTGTATGGCCGGTGTCATGTGGAATCAGTAACGGCATGTGTCAGTAACGACACATGATCGGCCATCGTATGTAATCAGT
AGTTGTATGTAATCGATAGT

Product: lipopolysaccharide biosynthesis protein WzzE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MSTDKTGSTNNEPSVDNELDIRGLCRTLWRGKVWIIGMAIIFAAIALGVSYLVKQQWSATAITDKPTVNNLGGYYSQQQF
LRNLDIRLNSGLVSEQPGISDEAYGEFITQLAAYDTRRDFWLQSDYYKQRLEGDAKADAALLDELVNNIVFTARDDKKIP
NDSIKLTAETASDANKLLRGYIDFASQRASSHLNDEIQGAWAARTQSMKAQVKRQEAVAQAVFDREVAAVKQALKVAGQQ
GITSSQTDTPAEQLADSKMFMLGKPMLEARLETLLATGPSFDIDYDQNRAMLATLNVGPTLDDKFQTYRYLRTPEDPVTR
DSPRRVFLLIMWGAIGALVGAGVVLVRRSSKAL

Sequences:

>Translated_353_residues
MSTDKTGSTNNEPSVDNELDIRGLCRTLWRGKVWIIGMAIIFAAIALGVSYLVKQQWSATAITDKPTVNNLGGYYSQQQF
LRNLDIRLNSGLVSEQPGISDEAYGEFITQLAAYDTRRDFWLQSDYYKQRLEGDAKADAALLDELVNNIVFTARDDKKIP
NDSIKLTAETASDANKLLRGYIDFASQRASSHLNDEIQGAWAARTQSMKAQVKRQEAVAQAVFDREVAAVKQALKVAGQQ
GITSSQTDTPAEQLADSKMFMLGKPMLEARLETLLATGPSFDIDYDQNRAMLATLNVGPTLDDKFQTYRYLRTPEDPVTR
DSPRRVFLLIMWGAIGALVGAGVVLVRRSSKAL
>Mature_352_residues
STDKTGSTNNEPSVDNELDIRGLCRTLWRGKVWIIGMAIIFAAIALGVSYLVKQQWSATAITDKPTVNNLGGYYSQQQFL
RNLDIRLNSGLVSEQPGISDEAYGEFITQLAAYDTRRDFWLQSDYYKQRLEGDAKADAALLDELVNNIVFTARDDKKIPN
DSIKLTAETASDANKLLRGYIDFASQRASSHLNDEIQGAWAARTQSMKAQVKRQEAVAQAVFDREVAAVKQALKVAGQQG
ITSSQTDTPAEQLADSKMFMLGKPMLEARLETLLATGPSFDIDYDQNRAMLATLNVGPTLDDKFQTYRYLRTPEDPVTRD
SPRRVFLLIMWGAIGALVGAGVVLVRRSSKAL

Specific function: Unknown

COG id: COG3765

COG function: function code M; Chain length determinant protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the wzzB/cld/rol family [H]

Homologues:

Organism=Escherichia coli, GI87082332, Length=336, Percent_Identity=68.1547619047619, Blast_Score=494, Evalue=1e-141,
Organism=Escherichia coli, GI87082029, Length=352, Percent_Identity=25, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1786802, Length=353, Percent_Identity=23.5127478753541, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 39115; Mature: 38984

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDKTGSTNNEPSVDNELDIRGLCRTLWRGKVWIIGMAIIFAAIALGVSYLVKQQWSAT
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE
AITDKPTVNNLGGYYSQQQFLRNLDIRLNSGLVSEQPGISDEAYGEFITQLAAYDTRRDF
ECCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
WLQSDYYKQRLEGDAKADAALLDELVNNIVFTARDDKKIPNDSIKLTAETASDANKLLRG
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCHHHHHHHHHH
YIDFASQRASSHLNDEIQGAWAARTQSMKAQVKRQEAVAQAVFDREVAAVKQALKVAGQQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GITSSQTDTPAEQLADSKMFMLGKPMLEARLETLLATGPSFDIDYDQNRAMLATLNVGPT
CCCCCCCCCCHHHHHCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCC
LDDKFQTYRYLRTPEDPVTRDSPRRVFLLIMWGAIGALVGAGVVLVRRSSKAL
CCHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCEEEEECCCCCC
>Mature Secondary Structure 
STDKTGSTNNEPSVDNELDIRGLCRTLWRGKVWIIGMAIIFAAIALGVSYLVKQQWSAT
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCE
AITDKPTVNNLGGYYSQQQFLRNLDIRLNSGLVSEQPGISDEAYGEFITQLAAYDTRRDF
ECCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHH
WLQSDYYKQRLEGDAKADAALLDELVNNIVFTARDDKKIPNDSIKLTAETASDANKLLRG
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCHHHHHHHHHH
YIDFASQRASSHLNDEIQGAWAARTQSMKAQVKRQEAVAQAVFDREVAAVKQALKVAGQQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GITSSQTDTPAEQLADSKMFMLGKPMLEARLETLLATGPSFDIDYDQNRAMLATLNVGPT
CCCCCCCCCCHHHHHCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCC
LDDKFQTYRYLRTPEDPVTRDSPRRVFLLIMWGAIGALVGAGVVLVRRSSKAL
CCHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]