| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218930803
Identifier: 218930803
GI number: 218930803
Start: 4267803
End: 4268321
Strand: Direct
Name: 218930803
Synonym: YPO3801
Alternate gene names: NA
Gene position: 4267803-4268321 (Clockwise)
Preceding gene: 218930802
Following gene: 218930804
Centisome position: 91.71
GC content: 49.71
Gene sequence:
>519_bases ATGAATACCATAAAAATGGCCATCACATTGCTATTGCTCTCATGGCACACCTGCTGGGCCGCAACGCCATTGGGGGATAT CGACGTCAAATTAGAGGTAACAGCCCAACCCAGAATCGAAATTGAAAAACCGCATGGTGGCTGGTACGACAATATCAAGC TGCACAATAGCCCAGAGAACCATGCCGTTTATGAGGTAGAAGTCCCGGTAGCCGTCAAACTCCGGCGGCAAGAGGGGTAT CAAATCTCAATTAAAAACCCGCTAATACTCACCCGCCAATCAGATGCTTTCAGCGCAATAGAACAGACATTCTCACCGGC GGAAGTGCGTTGGGGAAATAACCGCACCAATTTACGTTTACTGTCAGCGGTACCGGAGTCCTTTAGCGTCCCCCCACAGG CAACCCGCCACACCACCACCGATTATGTCTTACAGATATCCGCAAAAGCCCCCGCTGGGGACAATACTGCGGGGAAATAT CACGGGCAACTGACATTGGTATTCGAAGTTAATAGTTAA
Upstream 100 bases:
>100_bases GAGGATCAGGCGGTTAACCTACAGTGCCCTTCGGGCTAGCCTCTTGGTAATAAGCTATCAACAAATTTATCTGCATCAAG AAGAAGGATAAACCAGAAAC
Downstream 100 bases:
>100_bases TAGTTAATAGTTAATAGTTAATAGTTAATCGTTAATCGTTAATCGTTAATCGTTAATCGTTAATCGTTAATCGTTAATCG TTAATCGTTAATCATCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MNTIKMAITLLLLSWHTCWAATPLGDIDVKLEVTAQPRIEIEKPHGGWYDNIKLHNSPENHAVYEVEVPVAVKLRRQEGY QISIKNPLILTRQSDAFSAIEQTFSPAEVRWGNNRTNLRLLSAVPESFSVPPQATRHTTTDYVLQISAKAPAGDNTAGKY HGQLTLVFEVNS
Sequences:
>Translated_172_residues MNTIKMAITLLLLSWHTCWAATPLGDIDVKLEVTAQPRIEIEKPHGGWYDNIKLHNSPENHAVYEVEVPVAVKLRRQEGY QISIKNPLILTRQSDAFSAIEQTFSPAEVRWGNNRTNLRLLSAVPESFSVPPQATRHTTTDYVLQISAKAPAGDNTAGKY HGQLTLVFEVNS >Mature_172_residues MNTIKMAITLLLLSWHTCWAATPLGDIDVKLEVTAQPRIEIEKPHGGWYDNIKLHNSPENHAVYEVEVPVAVKLRRQEGY QISIKNPLILTRQSDAFSAIEQTFSPAEVRWGNNRTNLRLLSAVPESFSVPPQATRHTTTDYVLQISAKAPAGDNTAGKY HGQLTLVFEVNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19216; Mature: 19216
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTIKMAITLLLLSWHTCWAATPLGDIDVKLEVTAQPRIEIEKPHGGWYDNIKLHNSPEN CCHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEECCCCEEEECCCCCCCCCEEEECCCCC HAVYEVEVPVAVKLRRQEGYQISIKNPLILTRQSDAFSAIEQTFSPAEVRWGNNRTNLRL CEEEEEECCEEEEEECCCCCEEEECCCEEEEECCHHHHHHHHCCCCCEEEECCCCCCEEE LSAVPESFSVPPQATRHTTTDYVLQISAKAPAGDNTAGKYHGQLTLVFEVNS EEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEECCEEEEEEEECC >Mature Secondary Structure MNTIKMAITLLLLSWHTCWAATPLGDIDVKLEVTAQPRIEIEKPHGGWYDNIKLHNSPEN CCHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEECCCCEEEECCCCCCCCCEEEECCCCC HAVYEVEVPVAVKLRRQEGYQISIKNPLILTRQSDAFSAIEQTFSPAEVRWGNNRTNLRL CEEEEEECCEEEEEECCCCCEEEECCCEEEEECCHHHHHHHHCCCCCEEEECCCCCCEEE LSAVPESFSVPPQATRHTTTDYVLQISAKAPAGDNTAGKYHGQLTLVFEVNS EEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEECCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA