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The map label for this gene is mdcF [H]

Identifier: 218930793

GI number: 218930793

Start: 4256573

End: 4257499

Strand: Reverse

Name: mdcF [H]

Synonym: YPO3791

Alternate gene names: 218930793

Gene position: 4257499-4256573 (Counterclockwise)

Preceding gene: 218930794

Following gene: 218930792

Centisome position: 91.49

GC content: 53.29

Gene sequence:

>927_bases
ATGCCCGCCTTTGTTGTTTCGCTCTGGCACCAAATCGTTTTGTCTTCACCGTTATTTGTTTTGCTCGCACTGGGATATGC
TCTGGTGCGATTCGGTAAGTGGCCATCGACCATTACGGATGGTCTGACTCGCTTTGTTTTCTCCCTCGCGCTGCCTGCCA
TGCTATTTCGCATGATGTGTGACTTCTCCGAACGCCCGGCGGTTGATGCTCGCCTATTGATTGCTTTTTTTGGCAGTTGT
CTGGTGGTGTTTATCATTGGGCGGGTTATCGCCAAACGGGTGTTTCATCTGGATGGCGTTTCTGGCTCAGTCTTTGCCCT
CGGTGGGATCTTTTCCAATAACGTGATGCTAGGGCTACCTATTGCCACCATCATGCTGGGGGAGAAATCTATCCCTGCGG
TGGCCTTGGTGCTGGTATTTAACGGGCTGATCTTGTGGACGCTGGTCACCATCTCGGTGGAGTGGGCACGAAATGGTTCA
CCGACGATGGCTGGTTTTGTGAAAACGACCCGTAGTGTGCTGACTAACCCACTCATTATCGGGATTATTTCCGGCACCTT
ATTCAGCCTGACGGGGTTACATTTACCGGTGTTTATTGACCAACCGGTCAGTATGTTAGGGCAGGTTGCACCTCCGCTCT
CATTGATTGTCTTGGGTATGGGGCTGGCAGAATACCGCGTGACCGAAGGTTGGCAGATTAGTACCGCTATCTGCTTTCTC
AAGTTGATTGTGCAGCCGATGGTGATTTGGGCGCTGGCATGGGCGATGGATCTGCCCGCGCTAGAAACTCAAGTCGTGGT
GTTGCTGGGGTCGATGGCAACGGGGGTGAATGTTTATCTGATGTCACGTCAGTTTAATGTCCTCACCGGCCCCGCCGCCG
CCAGCCTGGTGATTCAACGGTACTGGCCGCCGTCACCACGCCACTGA

Upstream 100 bases:

>100_bases
CCTTCTCCTATAAAGACCCTCAATACCCGCCATAATAAAAACAGGTCAGCCATTCTTACATTTACGGGCTGACCTGGCCC
GGCCTGACAGGAAGTAAATC

Downstream 100 bases:

>100_bases
TTCTGACCATTATTGGGGTGGGCATATAGTGTGATATGCCAGCTAATATGAGAATCTAGCATCTGCACTTTCGATGCTAG
ATTTCCTCTGATAGCAGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MPAFVVSLWHQIVLSSPLFVLLALGYALVRFGKWPSTITDGLTRFVFSLALPAMLFRMMCDFSERPAVDARLLIAFFGSC
LVVFIIGRVIAKRVFHLDGVSGSVFALGGIFSNNVMLGLPIATIMLGEKSIPAVALVLVFNGLILWTLVTISVEWARNGS
PTMAGFVKTTRSVLTNPLIIGIISGTLFSLTGLHLPVFIDQPVSMLGQVAPPLSLIVLGMGLAEYRVTEGWQISTAICFL
KLIVQPMVIWALAWAMDLPALETQVVVLLGSMATGVNVYLMSRQFNVLTGPAAASLVIQRYWPPSPRH

Sequences:

>Translated_308_residues
MPAFVVSLWHQIVLSSPLFVLLALGYALVRFGKWPSTITDGLTRFVFSLALPAMLFRMMCDFSERPAVDARLLIAFFGSC
LVVFIIGRVIAKRVFHLDGVSGSVFALGGIFSNNVMLGLPIATIMLGEKSIPAVALVLVFNGLILWTLVTISVEWARNGS
PTMAGFVKTTRSVLTNPLIIGIISGTLFSLTGLHLPVFIDQPVSMLGQVAPPLSLIVLGMGLAEYRVTEGWQISTAICFL
KLIVQPMVIWALAWAMDLPALETQVVVLLGSMATGVNVYLMSRQFNVLTGPAAASLVIQRYWPPSPRH
>Mature_307_residues
PAFVVSLWHQIVLSSPLFVLLALGYALVRFGKWPSTITDGLTRFVFSLALPAMLFRMMCDFSERPAVDARLLIAFFGSCL
VVFIIGRVIAKRVFHLDGVSGSVFALGGIFSNNVMLGLPIATIMLGEKSIPAVALVLVFNGLILWTLVTISVEWARNGSP
TMAGFVKTTRSVLTNPLIIGIISGTLFSLTGLHLPVFIDQPVSMLGQVAPPLSLIVLGMGLAEYRVTEGWQISTAICFLK
LIVQPMVIWALAWAMDLPALETQVVVLLGSMATGVNVYLMSRQFNVLTGPAAASLVIQRYWPPSPRH

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 33430; Mature: 33298

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAFVVSLWHQIVLSSPLFVLLALGYALVRFGKWPSTITDGLTRFVFSLALPAMLFRMMC
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DFSERPAVDARLLIAFFGSCLVVFIIGRVIAKRVFHLDGVSGSVFALGGIFSNNVMLGLP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEECH
IATIMLGEKSIPAVALVLVFNGLILWTLVTISVEWARNGSPTMAGFVKTTRSVLTNPLII
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCHHE
GIISGTLFSLTGLHLPVFIDQPVSMLGQVAPPLSLIVLGMGLAEYRVTEGWQISTAICFL
EHHHHHHHHHHHCCCEEEECCHHHHHHHHCCHHHHHHHHCCHHHHCCCCCCCHHHHHHHH
KLIVQPMVIWALAWAMDLPALETQVVVLLGSMATGVNVYLMSRQFNVLTGPAAASLVIQR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCHHHHHHHHH
YWPPSPRH
CCCCCCCC
>Mature Secondary Structure 
PAFVVSLWHQIVLSSPLFVLLALGYALVRFGKWPSTITDGLTRFVFSLALPAMLFRMMC
CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DFSERPAVDARLLIAFFGSCLVVFIIGRVIAKRVFHLDGVSGSVFALGGIFSNNVMLGLP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEECH
IATIMLGEKSIPAVALVLVFNGLILWTLVTISVEWARNGSPTMAGFVKTTRSVLTNPLII
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCHHE
GIISGTLFSLTGLHLPVFIDQPVSMLGQVAPPLSLIVLGMGLAEYRVTEGWQISTAICFL
EHHHHHHHHHHHCCCEEEECCHHHHHHHHCCHHHHHHHHCCHHHHCCCCCCCHHHHHHHH
KLIVQPMVIWALAWAMDLPALETQVVVLLGSMATGVNVYLMSRQFNVLTGPAAASLVIQR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEECCHHHHHHHHH
YWPPSPRH
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10858449; 11481430 [H]