Click here to switch to the map view.

The map label for this gene is cstA [H]

Identifier: 218930786

GI number: 218930786

Start: 4246827

End: 4248644

Strand: Reverse

Name: cstA [H]

Synonym: YPO3784

Alternate gene names: 218930786

Gene position: 4248644-4246827 (Counterclockwise)

Preceding gene: 218930787

Following gene: 218930785

Centisome position: 91.3

GC content: 48.68

Gene sequence:

>1818_bases
ATGCTCATGCAACATGCGATTACCTTTGTTATCGCTTCCGCGTGTATCCTTACGATCTGCTACCGTTTATACGGTATCTT
TTTTGTTCGTAAGGTGCTGCGCGTCGATGACAGTGAAGTTACCCCTTCCCATACCTTTGAAGATGGCAAAGATTACGTTC
CGACTAAAAAGTGGGTGAACTTTGGTAGCCACTTCGCCGCAATCGCGGCGGCAGGCCCCTTGGTTGGCCCGGTGTTGGCT
GCTCAATACGGGTATTTACCCGGCTTCTTATGGCTTTTGATCGGTTGTGTTATCGGCGGTGCCGTACACGATACGGTCGT
CTTGTTTGCCTCAATGAAACATCAGGGGAAATCCCTGTCAGAAGTCGCTAAATCCGAACTTGGCCCAGTTGCTGGCTGGT
GTACCGGCCTGGCGATGTTGTTCATTATCACTATTACCATGGCCGGGTTATCGATGGTGGTCGTACATGCTCTGGAACGT
AACCCTTGGGGGACTTTCGCAGTGTTCATGACCATCCCTATCGCCATCTGTGTTGGCTTGTGGGAACGCATGACTGGCAG
CATGAAAGGGGCTTCGTATGTGGGTATTGCCGCTATCATGGTGTGCGTATTTGTCGGCCCGTATATTGAAGGCACTTGGC
TTGGTGAATGGTTAATGCTGAAAGCTGATACGGTCAGTATTATTCTGCCAATGTATGCTTTCTTTGCAACCGCACTGCCT
GTCTGGATGTTGTTAACCCCACGTGGTTACCTTTCCAGCTTTATGAAGATCGGTGTGTTCGGTGCACTGATTGTTGGTGT
TGTCTTCATTAATCCTGAAATTCAATTCCCTGCGGTTACGCAGTTTATTCACGGCGGTGGCCCAGTTCTTGCGGGACCGG
TTTGGCCGTTTATCTCTATTACTATTGCCTGTGGTGCTATCTCTGGGTTCCATGCCTTTATCGGTTCGGGTACGACACCG
AAACAGATCGATAAATGGAGCGATATCTTGCCCGTCGGTTTTGGTGCGATGCTGGCAGAATGTATGGTTGGGGTTATGGC
CCTTATCGCCGCAACCTCTTTGCATCCTGCTGACTACTTTGCCATTAACTCCTCTGCTGAAGCCTGGAGTGCGCTTGGTA
TGGAGGTTGTGAACCTGCCAAAATTGAGTGAAGAAATTGGTTTGGACCTGTATGGCCGTACCGGTGGTGCTGTCACTCTG
GCTGTAGGGATGACCGATATCTTCATTCGTGTGCCATGGTTTAATAGTTTGGCTGCTTACTTCTTCCAATTTGTTGTTAT
GTTTGAAGCGGTGTTTATCCTGACTGCGGTTGATTCAGGTACCCGTGTTGCCCGTTATTTACTGCAAGATTTTCTGGGCG
ATATCTGGGCTCCACTGAAACGGACCGATTGGTTACCAGGAACATTGGTTTGTAGTGTTATTGCCTGTGCATTGTGGGGT
TACCTCCTTAACTCAGGTGATATTAACTCTGTCTGGGCATTGTTCGGAGTATCGAACCAATTAATGGCTTCTGTTGGCTT
AATCATTGGTGCCACGATTATCCTGCGCTTGGCGACCAAGCGTGTGTATATGTTGACCTGTGTTATTCCTCTGGCTTACC
TGTTTGTCACAGTAAATTACGCCGGCTATTGGATGATCACTCACGTGTACTTTAATTCAGCGGCTAAAGGCTACAACCTG
TTCAATGGTATCATCTCAATTATCATGATGACCTTGGGTGTAATCATCTTGATCTCCGCGCTGAGGAAATGGCGTGAGCT
ATGGATCCGCAGGTCTGCTGAGATGGCTGGCAACAAAGTGGTTACTGCCAACGCCTGA

Upstream 100 bases:

>100_bases
TTTTTAACCGCTTAATGATACAAACTACCGCTTAACCAGTTCGCTGATATTTCTCTTATGGCGAGGCGTATGTTTACGCC
TGATAAATTCCCTGGAGAGA

Downstream 100 bases:

>100_bases
TACCACTGACTTATTGTGCTAATTTGTTTAAACGGCTGGAATCTTCTAGCCGTTTATTTTTTGTTAAGTTATAGCTACTG
CATTTTGAGTATGCTGATAT

Product: putative carbon starvation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 605; Mature: 605

Protein sequence:

>605_residues
MLMQHAITFVIASACILTICYRLYGIFFVRKVLRVDDSEVTPSHTFEDGKDYVPTKKWVNFGSHFAAIAAAGPLVGPVLA
AQYGYLPGFLWLLIGCVIGGAVHDTVVLFASMKHQGKSLSEVAKSELGPVAGWCTGLAMLFIITITMAGLSMVVVHALER
NPWGTFAVFMTIPIAICVGLWERMTGSMKGASYVGIAAIMVCVFVGPYIEGTWLGEWLMLKADTVSIILPMYAFFATALP
VWMLLTPRGYLSSFMKIGVFGALIVGVVFINPEIQFPAVTQFIHGGGPVLAGPVWPFISITIACGAISGFHAFIGSGTTP
KQIDKWSDILPVGFGAMLAECMVGVMALIAATSLHPADYFAINSSAEAWSALGMEVVNLPKLSEEIGLDLYGRTGGAVTL
AVGMTDIFIRVPWFNSLAAYFFQFVVMFEAVFILTAVDSGTRVARYLLQDFLGDIWAPLKRTDWLPGTLVCSVIACALWG
YLLNSGDINSVWALFGVSNQLMASVGLIIGATIILRLATKRVYMLTCVIPLAYLFVTVNYAGYWMITHVYFNSAAKGYNL
FNGIISIIMMTLGVIILISALRKWRELWIRRSAEMAGNKVVTANA

Sequences:

>Translated_605_residues
MLMQHAITFVIASACILTICYRLYGIFFVRKVLRVDDSEVTPSHTFEDGKDYVPTKKWVNFGSHFAAIAAAGPLVGPVLA
AQYGYLPGFLWLLIGCVIGGAVHDTVVLFASMKHQGKSLSEVAKSELGPVAGWCTGLAMLFIITITMAGLSMVVVHALER
NPWGTFAVFMTIPIAICVGLWERMTGSMKGASYVGIAAIMVCVFVGPYIEGTWLGEWLMLKADTVSIILPMYAFFATALP
VWMLLTPRGYLSSFMKIGVFGALIVGVVFINPEIQFPAVTQFIHGGGPVLAGPVWPFISITIACGAISGFHAFIGSGTTP
KQIDKWSDILPVGFGAMLAECMVGVMALIAATSLHPADYFAINSSAEAWSALGMEVVNLPKLSEEIGLDLYGRTGGAVTL
AVGMTDIFIRVPWFNSLAAYFFQFVVMFEAVFILTAVDSGTRVARYLLQDFLGDIWAPLKRTDWLPGTLVCSVIACALWG
YLLNSGDINSVWALFGVSNQLMASVGLIIGATIILRLATKRVYMLTCVIPLAYLFVTVNYAGYWMITHVYFNSAAKGYNL
FNGIISIIMMTLGVIILISALRKWRELWIRRSAEMAGNKVVTANA
>Mature_605_residues
MLMQHAITFVIASACILTICYRLYGIFFVRKVLRVDDSEVTPSHTFEDGKDYVPTKKWVNFGSHFAAIAAAGPLVGPVLA
AQYGYLPGFLWLLIGCVIGGAVHDTVVLFASMKHQGKSLSEVAKSELGPVAGWCTGLAMLFIITITMAGLSMVVVHALER
NPWGTFAVFMTIPIAICVGLWERMTGSMKGASYVGIAAIMVCVFVGPYIEGTWLGEWLMLKADTVSIILPMYAFFATALP
VWMLLTPRGYLSSFMKIGVFGALIVGVVFINPEIQFPAVTQFIHGGGPVLAGPVWPFISITIACGAISGFHAFIGSGTTP
KQIDKWSDILPVGFGAMLAECMVGVMALIAATSLHPADYFAINSSAEAWSALGMEVVNLPKLSEEIGLDLYGRTGGAVTL
AVGMTDIFIRVPWFNSLAAYFFQFVVMFEAVFILTAVDSGTRVARYLLQDFLGDIWAPLKRTDWLPGTLVCSVIACALWG
YLLNSGDINSVWALFGVSNQLMASVGLIIGATIILRLATKRVYMLTCVIPLAYLFVTVNYAGYWMITHVYFNSAAKGYNL
FNGIISIIMMTLGVIILISALRKWRELWIRRSAEMAGNKVVTANA

Specific function: Peptide Utilization During Carbon Starvation. [C]

COG id: COG1966

COG function: function code T; Carbon starvation protein, predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CstA family [H]

Homologues:

Organism=Escherichia coli, GI1786814, Length=572, Percent_Identity=42.1328671328671, Blast_Score=425, Evalue=1e-120,
Organism=Escherichia coli, GI87082431, Length=584, Percent_Identity=40.0684931506849, Blast_Score=413, Evalue=1e-116,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003706 [H]

Pfam domain/function: PF02554 CstA [H]

EC number: NA

Molecular weight: Translated: 65674; Mature: 65674

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMQHAITFVIASACILTICYRLYGIFFVRKVLRVDDSEVTPSHTFEDGKDYVPTKKWVN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHC
FGSHFAAIAAAGPLVGPVLAAQYGYLPGFLWLLIGCVIGGAVHDTVVLFASMKHQGKSLS
CCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHH
EVAKSELGPVAGWCTGLAMLFIITITMAGLSMVVVHALERNPWGTFAVFMTIPIAICVGL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
WERMTGSMKGASYVGIAAIMVCVFVGPYIEGTWLGEWLMLKADTVSIILPMYAFFATALP
HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHH
VWMLLTPRGYLSSFMKIGVFGALIVGVVFINPEIQFPAVTQFIHGGGPVLAGPVWPFISI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEECCCHHHHHHH
TIACGAISGFHAFIGSGTTPKQIDKWSDILPVGFGAMLAECMVGVMALIAATSLHPADYF
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
AINSSAEAWSALGMEVVNLPKLSEEIGLDLYGRTGGAVTLAVGMTDIFIRVPWFNSLAAY
EECCCHHHHHHHCHHHHCCCCHHHHHCCEEECCCCCEEEEEECCEEEEEECCCHHHHHHH
FFQFVVMFEAVFILTAVDSGTRVARYLLQDFLGDIWAPLKRTDWLPGTLVCSVIACALWG
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHH
YLLNSGDINSVWALFGVSNQLMASVGLIIGATIILRLATKRVYMLTCVIPLAYLFVTVNY
HHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGYWMITHVYFNSAAKGYNLFNGIISIIMMTLGVIILISALRKWRELWIRRSAEMAGNKV
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
VTANA
EEECC
>Mature Secondary Structure
MLMQHAITFVIASACILTICYRLYGIFFVRKVLRVDDSEVTPSHTFEDGKDYVPTKKWVN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHC
FGSHFAAIAAAGPLVGPVLAAQYGYLPGFLWLLIGCVIGGAVHDTVVLFASMKHQGKSLS
CCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHH
EVAKSELGPVAGWCTGLAMLFIITITMAGLSMVVVHALERNPWGTFAVFMTIPIAICVGL
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
WERMTGSMKGASYVGIAAIMVCVFVGPYIEGTWLGEWLMLKADTVSIILPMYAFFATALP
HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHH
VWMLLTPRGYLSSFMKIGVFGALIVGVVFINPEIQFPAVTQFIHGGGPVLAGPVWPFISI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEECCCHHHHHHH
TIACGAISGFHAFIGSGTTPKQIDKWSDILPVGFGAMLAECMVGVMALIAATSLHPADYF
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE
AINSSAEAWSALGMEVVNLPKLSEEIGLDLYGRTGGAVTLAVGMTDIFIRVPWFNSLAAY
EECCCHHHHHHHCHHHHCCCCHHHHHCCEEECCCCCEEEEEECCEEEEEECCCHHHHHHH
FFQFVVMFEAVFILTAVDSGTRVARYLLQDFLGDIWAPLKRTDWLPGTLVCSVIACALWG
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHH
YLLNSGDINSVWALFGVSNQLMASVGLIIGATIILRLATKRVYMLTCVIPLAYLFVTVNY
HHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGYWMITHVYFNSAAKGYNLFNGIISIIMMTLGVIILISALRKWRELWIRRSAEMAGNKV
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
VTANA
EEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]