| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is tatA
Identifier: 218930780
GI number: 218930780
Start: 4240724
End: 4240990
Strand: Reverse
Name: tatA
Synonym: YPO3778
Alternate gene names: 218930780
Gene position: 4240990-4240724 (Counterclockwise)
Preceding gene: 218930781
Following gene: 218930779
Centisome position: 91.13
GC content: 43.82
Gene sequence:
>267_bases ATGGGCAGTATCGGTTGGGCACAATTATTGATTATAGCGGTGATCGTCGTTTTGCTGTTTGGTACAAACAAACTGCGGAC GTTAGGGTCAGATTTGGGGGCATCTATCAAAGGCTTTAAAAAAGCGATGGGAGATGATTCGCAAACCCCACCAACAAACG TTGATAAGACCAGCAATGATGCTGACTTTGCGAAATCGATTACAGAAAAGCAGCAGCCCGTAGCAAAAGCTGAAGAATCT AAGAGTCACGAAAAAGAACAGGGATAA
Upstream 100 bases:
>100_bases CTAGTTCAAAATGCGGTAAGTTAGATCAGTATCCACAGAGGCTGTATAACGTATAATACGATTCTCTGTGGAATAACCCC TATAAATAGAGGTAGGTAAT
Downstream 100 bases:
>100_bases GCTGTGTTCGATATCGGGTTTAGTGAACTGCTACTGGTCCTTGTAATTGGTCTGGTCGTACTTGGGCCGGAGCGATTACC TGTCGCCGTAAGGACTGTTT
Product: Sec-independent protein translocase protein TatA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MGSIGWAQLLIIAVIVVLLFGTNKLRTLGSDLGASIKGFKKAMGDDSQTPPTNVDKTSNDADFAKSITEKQQPVAKAEES KSHEKEQG
Sequences:
>Translated_88_residues MGSIGWAQLLIIAVIVVLLFGTNKLRTLGSDLGASIKGFKKAMGDDSQTPPTNVDKTSNDADFAKSITEKQQPVAKAEES KSHEKEQG >Mature_87_residues GSIGWAQLLIIAVIVVLLFGTNKLRTLGSDLGASIKGFKKAMGDDSQTPPTNVDKTSNDADFAKSITEKQQPVAKAEESK SHEKEQG
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatA/E family
Homologues:
Organism=Escherichia coli, GI87082337, Length=92, Percent_Identity=65.2173913043478, Blast_Score=98, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATA_YERPE (Q8ZAM2)
Other databases:
- EMBL: AL590842 - EMBL: AE009952 - EMBL: AE017042 - PIR: AI0459 - RefSeq: NP_667790.1 - RefSeq: NP_994562.1 - RefSeq: YP_002348655.1 - GeneID: 1145399 - GeneID: 1176612 - GeneID: 2764968 - GenomeReviews: AE009952_GR - GenomeReviews: AE017042_GR - GenomeReviews: AL590842_GR - KEGG: ype:YPO3778 - KEGG: ypk:y0452 - KEGG: ypm:YP_3271 - HOGENOM: HBG751935 - OMA: FETKNIT - ProtClustDB: CLSK889564 - BioCyc: YPES187410:Y0452-MONOMER - BioCyc: YPES214092:YPO3778-MONOMER - HAMAP: MF_00236 - InterPro: IPR003369 - InterPro: IPR006312 - TIGRFAMs: TIGR01411
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 9389; Mature: 9258
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x18eba460)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSIGWAQLLIIAVIVVLLFGTNKLRTLGSDLGASIKGFKKAMGDDSQTPPTNVDKTSND CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH ADFAKSITEKQQPVAKAEESKSHEKEQG HHHHHHHHHHHHHHHHHHHHHHHCCCCH >Mature Secondary Structure GSIGWAQLLIIAVIVVLLFGTNKLRTLGSDLGASIKGFKKAMGDDSQTPPTNVDKTSND CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH ADFAKSITEKQQPVAKAEESKSHEKEQG HHHHHHHHHHHHHHHHHHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430