| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is metA [H]
Identifier: 218930732
GI number: 218930732
Start: 4173345
End: 4174274
Strand: Reverse
Name: metA [H]
Synonym: YPO3727
Alternate gene names: 218930732
Gene position: 4174274-4173345 (Counterclockwise)
Preceding gene: 218930735
Following gene: 218930731
Centisome position: 89.7
GC content: 44.52
Gene sequence:
>930_bases ATGCCAATTCGGGTTCCTGATGAATTACCTGCAGTGAGTTTCTTGCGCAATGAGAATGTTTTTGTGATGGCTTCATCGCG TGCTAAAACTCAGGAAATTCGGCCCCTGAAGGTATTGATTTTAAATCTGATGCCTAAAAAAATTGAGACGGAGAATCAAT TCCTACGTTTACTCTCTAACTCGCCACTCCAGGTTGATATTCAATTGTTGAGGGTTGATAGTCGTGAGTCTAAAAATACG CCTACGGAGCATCTGAACAACTTTTACTGCGATTTTGAGGACATTCAGGACCAGAATTTTGATGGCTTGATCGTAACCGG CGCTCCTCTGGGTTTAGTCGATTTCTGTGATGTGGCTTATTGGCCACAAATTGAACGTATTATTGCCTGGGCAAAAGAGC ATGTGACATCAACTCTATTTGTCTGTTGGGCGGTGCAGGCGGCGTTAAATATCTTGTATGGCATCCCGAAGATGACGCGC GAGGTCAAACTCTCTGGTATCTATCAGCATCAAACACTCGAACCGCTGGCCTTATTGACGCGTGGTTTTGATGAAACATT TCTGGCTCCTCATTCCCGCTATGCTGATTTTCCCGTTGAAGTCCTTCAACAATATACTGATTTGGATATCTTAGTGTCGT CAGAAGAGGCTGGGGCTTATCTGTTTGCCAGTAAAGATAAGCGGGTGGCTTTTGTTACCGGTCATCCCGAGTATGATGTC GATACGTTAGCGGGTGAATATCAGCGTGATCTGGCTGCAGGCCTTAACCCACAAGTTCCTCTTAATTATTTCCCTTCTGA CGATGCATCGTTACGACCAAAAGCATCATGGCGCAGTCATGGGCATCTACTGTTTGCCAATTGGCTCAACTACTATGTTT ACCAAATTACGCCATTTGATTTGCGACATATGAATCCTACCCTTGATTGA
Upstream 100 bases:
>100_bases TTTCAGGTTGTTACAGTTCGCTCGACTTTTCATCTAAGATCCGCTATCTTCAGGCATCTAGAAGTCTAAACGTATAAACG GATATATTGAGGATGTAGGC
Downstream 100 bases:
>100_bases TTTTTCCCCTTCTCGATGTTCATCGTCGCATAGATGCTAATTATGGCGGCTGAATCGAGGCCGCCTATTATTTTCTTCCC TTCCAATTACCTTTTTCCCT
Product: homoserine O-succinyltransferase
Products: NA
Alternate protein names: Homoserine O-transsuccinylase; HTS [H]
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MPIRVPDELPAVSFLRNENVFVMASSRAKTQEIRPLKVLILNLMPKKIETENQFLRLLSNSPLQVDIQLLRVDSRESKNT PTEHLNNFYCDFEDIQDQNFDGLIVTGAPLGLVDFCDVAYWPQIERIIAWAKEHVTSTLFVCWAVQAALNILYGIPKMTR EVKLSGIYQHQTLEPLALLTRGFDETFLAPHSRYADFPVEVLQQYTDLDILVSSEEAGAYLFASKDKRVAFVTGHPEYDV DTLAGEYQRDLAAGLNPQVPLNYFPSDDASLRPKASWRSHGHLLFANWLNYYVYQITPFDLRHMNPTLD
Sequences:
>Translated_309_residues MPIRVPDELPAVSFLRNENVFVMASSRAKTQEIRPLKVLILNLMPKKIETENQFLRLLSNSPLQVDIQLLRVDSRESKNT PTEHLNNFYCDFEDIQDQNFDGLIVTGAPLGLVDFCDVAYWPQIERIIAWAKEHVTSTLFVCWAVQAALNILYGIPKMTR EVKLSGIYQHQTLEPLALLTRGFDETFLAPHSRYADFPVEVLQQYTDLDILVSSEEAGAYLFASKDKRVAFVTGHPEYDV DTLAGEYQRDLAAGLNPQVPLNYFPSDDASLRPKASWRSHGHLLFANWLNYYVYQITPFDLRHMNPTLD >Mature_308_residues PIRVPDELPAVSFLRNENVFVMASSRAKTQEIRPLKVLILNLMPKKIETENQFLRLLSNSPLQVDIQLLRVDSRESKNTP TEHLNNFYCDFEDIQDQNFDGLIVTGAPLGLVDFCDVAYWPQIERIIAWAKEHVTSTLFVCWAVQAALNILYGIPKMTRE VKLSGIYQHQTLEPLALLTRGFDETFLAPHSRYADFPVEVLQQYTDLDILVSSEEAGAYLFASKDKRVAFVTGHPEYDVD TLAGEYQRDLAAGLNPQVPLNYFPSDDASLRPKASWRSHGHLLFANWLNYYVYQITPFDLRHMNPTLD
Specific function: Methionine biosynthesis; HTS variant; first step. [C]
COG id: COG1897
COG function: function code E; Homoserine trans-succinylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HTS family [H]
Homologues:
Organism=Escherichia coli, GI1790443, Length=309, Percent_Identity=79.6116504854369, Blast_Score=526, Evalue=1e-151,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005697 - ProDom: PD037892 [H]
Pfam domain/function: PF04204 HTS [H]
EC number: =2.3.1.46 [H]
Molecular weight: Translated: 35366; Mature: 35234
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRVPDELPAVSFLRNENVFVMASSRAKTQEIRPLKVLILNLMPKKIETENQFLRLLSN CCCCCCCCCCHHHHHCCCCEEEEECCCCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHCC SPLQVDIQLLRVDSRESKNTPTEHLNNFYCDFEDIQDQNFDGLIVTGAPLGLVDFCDVAY CCCEEEEEEEEECCCCCCCCCHHHHHCEECCHHHHCCCCCCEEEEECCCCCHHHHHHHHH WPQIERIIAWAKEHVTSTLFVCWAVQAALNILYGIPKMTREVKLSGIYQHQTLEPLALLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCHHHHHH RGFDETFLAPHSRYADFPVEVLQQYTDLDILVSSEEAGAYLFASKDKRVAFVTGHPEYDV CCCCHHHCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCCH DTLAGEYQRDLAAGLNPQVPLNYFPSDDASLRPKASWRSHGHLLFANWLNYYVYQITPFD HHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCH LRHMNPTLD HCCCCCCCC >Mature Secondary Structure PIRVPDELPAVSFLRNENVFVMASSRAKTQEIRPLKVLILNLMPKKIETENQFLRLLSN CCCCCCCCCHHHHHCCCCEEEEECCCCCCHHCCHHHHHHHHHCCCCCCHHHHHHHHHCC SPLQVDIQLLRVDSRESKNTPTEHLNNFYCDFEDIQDQNFDGLIVTGAPLGLVDFCDVAY CCCEEEEEEEEECCCCCCCCCHHHHHCEECCHHHHCCCCCCEEEEECCCCCHHHHHHHHH WPQIERIIAWAKEHVTSTLFVCWAVQAALNILYGIPKMTREVKLSGIYQHQTLEPLALLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCHHHHHH RGFDETFLAPHSRYADFPVEVLQQYTDLDILVSSEEAGAYLFASKDKRVAFVTGHPEYDV CCCCHHHCCCCCCCCCCHHHHHHHHCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCCH DTLAGEYQRDLAAGLNPQVPLNYFPSDDASLRPKASWRSHGHLLFANWLNYYVYQITPFD HHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCH LRHMNPTLD HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA