| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930715
Identifier: 218930715
GI number: 218930715
Start: 4142670
End: 4143008
Strand: Reverse
Name: 218930715
Synonym: YPO3709
Alternate gene names: NA
Gene position: 4143008-4142670 (Counterclockwise)
Preceding gene: 218930716
Following gene: 218930713
Centisome position: 89.03
GC content: 31.86
Gene sequence:
>339_bases ATGACTGGATCCTCGCTTGTTGTCGAAAAAAATCCTGTAGGAAATTTCCTTAAATTTGCGATGAATTTTCCTAATTTATT GCTGTTGTTTTCTGATGGCACTTTAATTAAGCAAGTGGAACGCGAATTAAAAACACATCTTATTTGTAATGAGTTTGTTA AAAATAAATCCAAAATAGTCACTGTGTATATCACTTTGGGAAATGATGCTCTGCTATTAATATATTATTCTAACCGAGTA TTTTATAAAAAATCATATATCAAATGCGGCGATATCGCGTGTATGAACTATACGGTAAATGAGGGGTATTTAACTACGGA GATTATTTTGTGGCGTTAA
Upstream 100 bases:
>100_bases AAGACTTGCAGTATTTATTAATACACAAATGAGTGACATCAATAAACAAATTAACCACGCCAATGATAGCCACTTTTTTT GTCATAGCATGACATTAAAT
Downstream 100 bases:
>100_bases TATATCCCTGGCGGCGACACATTGAATTGCACTCAATATCGGTTAAGTGCGCGATGAAGATAAAAGGAATATCAGGCGGG TTAAATACACTAAAAACCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MTGSSLVVEKNPVGNFLKFAMNFPNLLLLFSDGTLIKQVERELKTHLICNEFVKNKSKIVTVYITLGNDALLLIYYSNRV FYKKSYIKCGDIACMNYTVNEGYLTTEIILWR
Sequences:
>Translated_112_residues MTGSSLVVEKNPVGNFLKFAMNFPNLLLLFSDGTLIKQVERELKTHLICNEFVKNKSKIVTVYITLGNDALLLIYYSNRV FYKKSYIKCGDIACMNYTVNEGYLTTEIILWR >Mature_111_residues TGSSLVVEKNPVGNFLKFAMNFPNLLLLFSDGTLIKQVERELKTHLICNEFVKNKSKIVTVYITLGNDALLLIYYSNRVF YKKSYIKCGDIACMNYTVNEGYLTTEIILWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12898; Mature: 12767
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSSLVVEKNPVGNFLKFAMNFPNLLLLFSDGTLIKQVERELKTHLICNEFVKNKSKIV CCCCEEEEECCCCCHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEE TVYITLGNDALLLIYYSNRVFYKKSYIKCGDIACMNYTVNEGYLTTEIILWR EEEEEECCCEEEEEEECCEEEEEECCCEECCEEEEEEEECCCEEEEEEEEEC >Mature Secondary Structure TGSSLVVEKNPVGNFLKFAMNFPNLLLLFSDGTLIKQVERELKTHLICNEFVKNKSKIV CCCEEEEECCCCCHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEE TVYITLGNDALLLIYYSNRVFYKKSYIKCGDIACMNYTVNEGYLTTEIILWR EEEEEECCCEEEEEEECCEEEEEECCCEECCEEEEEEEECCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA