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The map label for this gene is pcaC [H]

Identifier: 218930659

GI number: 218930659

Start: 4069188

End: 4069583

Strand: Direct

Name: pcaC [H]

Synonym: YPO3649

Alternate gene names: 218930659

Gene position: 4069188-4069583 (Clockwise)

Preceding gene: 218930658

Following gene: 218930660

Centisome position: 87.44

GC content: 50.76

Gene sequence:

>396_bases
ATGGTAGCTCAAGATCGTTTTGAACGGGGTTTTCACAACCGAAAAGTAGTACTGGGCGCGGAACATGTTGAAACATCATG
GGGTAATTCGGATGAATTCAACCGACCGGTGCAAAAACTGATCACTGAATATTGCTGGGGAGAGGTCTGGGGGGATCCGG
CACTCACTTTTAAAACTCGCAGTATGCTGAATATTGGCATTCTCACGGCGATGGGCCAGCATCATGAGCTTTCTTTACAC
GTTAAAGGCGCGCTGAGAAATGGTGTCACACGCGAGGAGATACGCGCGGTGTTGCTACAAACCGTGGTGTATTGCGGTGC
GCCAGTCGCGCTGGCGGCGTTTCGTATTGCCAGTGCCGCAATCAAAGCGTATGACGATGAGATTGCTGACAGTTAG

Upstream 100 bases:

>100_bases
TCTAACCATCCTGTCATACAATCAGACGTTATGTATCAGACACTCTGTTGTGGCGTGAGTGTCGAATAGGGTGGGTTATG
AAATCGGAAGGAGGGTGATG

Downstream 100 bases:

>100_bases
CACTCCCTTCGCGTCTAATGCCAACTCCACCGGTTGTGGCGATCAATTTGTGGCGATCAATAACATGCCCTCTGCGGTAG
ATTTCAATCTTATATCTCTA

Product: putative gamma carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MVAQDRFERGFHNRKVVLGAEHVETSWGNSDEFNRPVQKLITEYCWGEVWGDPALTFKTRSMLNIGILTAMGQHHELSLH
VKGALRNGVTREEIRAVLLQTVVYCGAPVALAAFRIASAAIKAYDDEIADS

Sequences:

>Translated_131_residues
MVAQDRFERGFHNRKVVLGAEHVETSWGNSDEFNRPVQKLITEYCWGEVWGDPALTFKTRSMLNIGILTAMGQHHELSLH
VKGALRNGVTREEIRAVLLQTVVYCGAPVALAAFRIASAAIKAYDDEIADS
>Mature_131_residues
MVAQDRFERGFHNRKVVLGAEHVETSWGNSDEFNRPVQKLITEYCWGEVWGDPALTFKTRSMLNIGILTAMGQHHELSLH
VKGALRNGVTREEIRAVLLQTVVYCGAPVALAAFRIASAAIKAYDDEIADS

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 14584; Mature: 14584

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAQDRFERGFHNRKVVLGAEHVETSWGNSDEFNRPVQKLITEYCWGEVWGDPALTFKTR
CCCHHHHHCCCCCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHH
SMLNIGILTAMGQHHELSLHVKGALRNGVTREEIRAVLLQTVVYCGAPVALAAFRIASAA
HHHHHHHHHHCCCCCEEEEEEEEHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IKAYDDEIADS
HHHHHHHCCCC
>Mature Secondary Structure
MVAQDRFERGFHNRKVVLGAEHVETSWGNSDEFNRPVQKLITEYCWGEVWGDPALTFKTR
CCCHHHHHCCCCCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHH
SMLNIGILTAMGQHHELSLHVKGALRNGVTREEIRAVLLQTVVYCGAPVALAAFRIASAA
HHHHHHHHHHCCCCCEEEEEEEEHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IKAYDDEIADS
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]