| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218930657
Identifier: 218930657
GI number: 218930657
Start: 4067228
End: 4068055
Strand: Direct
Name: 218930657
Synonym: YPO3647
Alternate gene names: NA
Gene position: 4067228-4068055 (Clockwise)
Preceding gene: 218930652
Following gene: 218930658
Centisome position: 87.4
GC content: 52.54
Gene sequence:
>828_bases ATGGAGAACCGCGATATGTCTGCATCCCATGAGAATTACCGGATTTTTGCTATCAAGTACGCTCATCACCACCGGCTAAC CCGCGATAACTTTCTGGGGGGAGATCCACACGACGGGCCGATGCCGATTGACTATTTTGTCTGGGCCATCGTAGGGACCA CGCGCACGATTATGGTTGATACCGGATTTGATGCTGCCATGGCCCATCAGCGTGGCCGGACCATCACGCATTGCATTGAA GACGGTCTGAGCCAACTTGGCATTGATGCGGGAAAGATTGAAGACGTCATTATTTCGCATATGCACTATGACCATGCGGG TAATCACGGATTGTTTCCCAACGCGCGTTTTCATCTTCAGGATCGTGAGATGGCGTTTTGTACTGGCCGCTGTATGGGCC ATCACGGCTTAAGTCAGGCTTTTGATGTAGAAGATGTTAAAGCGATGGTAGGGAGGCTGTTTGCTGGGCGTCTACAGTTT CACCATGGGGATGCCGAGATTGCTCCCGGTATCAGTGTTCACCGTGTCGGTGGGCACACTGACGGTTTACAAATCATACG AGTACACACCGCCCGTGGCTGGGTGGTGTTGGCATCGGATGCCACGCATTTCTACGCTAATATTCAGCAACGCCGGCCTT ATCCAATCCTTTATAACGTTGGCGATGTCTTGGAAGGCTACAACACACTTTATCGCTGGGCCGATTCATTCGACCATATT ATTCCCGGACATGATCCGATGGTGTTGCAACGTTACCCAGCGGGCACGCCGGAAACGGCCGCATGGATCGCTCAGGTTGA TGTTGCCCCCCTCACTCAGTGGACGTGA
Upstream 100 bases:
>100_bases TTTTTTAATCAAACCTATGGCTATAGGTGGACGTGAAGACGTGGCTGTAAACCGTTATCGGTGAAGTATTGCCCGCATTG GCAGGCATAGGCCGTTTGAC
Downstream 100 bases:
>100_bases AATGTATTTCAGCCGAACGGATTAAATGCGTGCTCTGGCGACCAATAACGATTAAGGGGGTCAGATGAAACAACTACAAC GTATTGGTTTTATTGGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily; Metallo-Beta-Lactamase Family Protein; Hydrolase; Metal Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolases Including Glyoxylases; Beta-Lactamase-Like; Beta-Lactamase Class B; Beta-Lactamase-Like Protein
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MENRDMSASHENYRIFAIKYAHHHRLTRDNFLGGDPHDGPMPIDYFVWAIVGTTRTIMVDTGFDAAMAHQRGRTITHCIE DGLSQLGIDAGKIEDVIISHMHYDHAGNHGLFPNARFHLQDREMAFCTGRCMGHHGLSQAFDVEDVKAMVGRLFAGRLQF HHGDAEIAPGISVHRVGGHTDGLQIIRVHTARGWVVLASDATHFYANIQQRRPYPILYNVGDVLEGYNTLYRWADSFDHI IPGHDPMVLQRYPAGTPETAAWIAQVDVAPLTQWT
Sequences:
>Translated_275_residues MENRDMSASHENYRIFAIKYAHHHRLTRDNFLGGDPHDGPMPIDYFVWAIVGTTRTIMVDTGFDAAMAHQRGRTITHCIE DGLSQLGIDAGKIEDVIISHMHYDHAGNHGLFPNARFHLQDREMAFCTGRCMGHHGLSQAFDVEDVKAMVGRLFAGRLQF HHGDAEIAPGISVHRVGGHTDGLQIIRVHTARGWVVLASDATHFYANIQQRRPYPILYNVGDVLEGYNTLYRWADSFDHI IPGHDPMVLQRYPAGTPETAAWIAQVDVAPLTQWT >Mature_275_residues MENRDMSASHENYRIFAIKYAHHHRLTRDNFLGGDPHDGPMPIDYFVWAIVGTTRTIMVDTGFDAAMAHQRGRTITHCIE DGLSQLGIDAGKIEDVIISHMHYDHAGNHGLFPNARFHLQDREMAFCTGRCMGHHGLSQAFDVEDVKAMVGRLFAGRLQF HHGDAEIAPGISVHRVGGHTDGLQIIRVHTARGWVVLASDATHFYANIQQRRPYPILYNVGDVLEGYNTLYRWADSFDHI IPGHDPMVLQRYPAGTPETAAWIAQVDVAPLTQWT
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30924; Mature: 30924
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENRDMSASHENYRIFAIKYAHHHRLTRDNFLGGDPHDGPMPIDYFVWAIVGTTRTIMVD CCCCCCCCCCCCEEEEEEEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEE TGFDAAMAHQRGRTITHCIEDGLSQLGIDAGKIEDVIISHMHYDHAGNHGLFPNARFHLQ CCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEC DREMAFCTGRCMGHHGLSQAFDVEDVKAMVGRLFAGRLQFHHGDAEIAPGISVHRVGGHT CCCEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEECCCCC DGLQIIRVHTARGWVVLASDATHFYANIQQRRPYPILYNVGDVLEGYNTLYRWADSFDHI CCEEEEEEEECCCEEEEECCCCEEEHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCC IPGHDPMVLQRYPAGTPETAAWIAQVDVAPLTQWT CCCCCCEEEEECCCCCCCHHEEEEEECCCCCCCCC >Mature Secondary Structure MENRDMSASHENYRIFAIKYAHHHRLTRDNFLGGDPHDGPMPIDYFVWAIVGTTRTIMVD CCCCCCCCCCCCEEEEEEEEHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEE TGFDAAMAHQRGRTITHCIEDGLSQLGIDAGKIEDVIISHMHYDHAGNHGLFPNARFHLQ CCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEC DREMAFCTGRCMGHHGLSQAFDVEDVKAMVGRLFAGRLQFHHGDAEIAPGISVHRVGGHT CCCEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEECCCCC DGLQIIRVHTARGWVVLASDATHFYANIQQRRPYPILYNVGDVLEGYNTLYRWADSFDHI CCEEEEEEEECCCEEEEECCCCEEEHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCCC IPGHDPMVLQRYPAGTPETAAWIAQVDVAPLTQWT CCCCCCEEEEECCCCCCCHHEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA