| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930620
Identifier: 218930620
GI number: 218930620
Start: 4024505
End: 4024990
Strand: Direct
Name: 218930620
Synonym: YPO3610
Alternate gene names: NA
Gene position: 4024505-4024990 (Clockwise)
Preceding gene: 218930619
Following gene: 218930623
Centisome position: 86.48
GC content: 33.13
Gene sequence:
>486_bases ATGAAAAATCCTTGTCAGAATTGTGAGAAGAATATCGATTTGTCAGATATTAAATCTGTAGAGAAAACTTTAGGTTATTC TTTCCCTGAAGCGTTTGTATCACATTACTTATCTTTTAATGGTGGAGTGCCTTTGAGGGCGTGGTGGGCTTGTGATGATG GTTGTGAACCTTTAGAAATAGCCGCTTTTAAACCATTTAAATATCATAAAATGACCAATGATAATCCTAATTCATTGATC GATGGTTGTTATAATGAAATGATTAGAAAAAATGTAATCCCCTCAAACATAATACCGTTTGGAAATGATTGGGGAGGGAA CTTTTTTTGCTTAAATAAAGATGATGATAGTGTTGTTTTTTATGCAACAGACTCATTTGACCCGGAAGTATCTATGAGCA AGAATCATGATGTATTGCAAAAGAAATTAACTTCTTCCTTTGAAGAATTTATCAATGGATTGGTCGAAGAAGACGATTTA GAGTAA
Upstream 100 bases:
>100_bases CCTTCTCAGTCTTATGGCAGTGCAGATGCTGTTGCTATATCGCATTCGAAAGGTTGGTTAAAGGGCCGAATTCCTAAGGC GCTAAGGTCGGGGTGTTAAA
Downstream 100 bases:
>100_bases GGCATGTAAGCGTATGGGGAGGATCATTGTTGGATCCTCCTTGAATATATTACAAAAGCATGTTCATTTTTTGAAACTGA ATAATCACCTTACCCGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKNPCQNCEKNIDLSDIKSVEKTLGYSFPEAFVSHYLSFNGGVPLRAWWACDDGCEPLEIAAFKPFKYHKMTNDNPNSLI DGCYNEMIRKNVIPSNIIPFGNDWGGNFFCLNKDDDSVVFYATDSFDPEVSMSKNHDVLQKKLTSSFEEFINGLVEEDDL E
Sequences:
>Translated_161_residues MKNPCQNCEKNIDLSDIKSVEKTLGYSFPEAFVSHYLSFNGGVPLRAWWACDDGCEPLEIAAFKPFKYHKMTNDNPNSLI DGCYNEMIRKNVIPSNIIPFGNDWGGNFFCLNKDDDSVVFYATDSFDPEVSMSKNHDVLQKKLTSSFEEFINGLVEEDDL E >Mature_161_residues MKNPCQNCEKNIDLSDIKSVEKTLGYSFPEAFVSHYLSFNGGVPLRAWWACDDGCEPLEIAAFKPFKYHKMTNDNPNSLI DGCYNEMIRKNVIPSNIIPFGNDWGGNFFCLNKDDDSVVFYATDSFDPEVSMSKNHDVLQKKLTSSFEEFINGLVEEDDL E
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18314; Mature: 18314
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNPCQNCEKNIDLSDIKSVEKTLGYSFPEAFVSHYLSFNGGVPLRAWWACDDGCEPLEI CCCHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEE AAFKPFKYHKMTNDNPNSLIDGCYNEMIRKNVIPSNIIPFGNDWGGNFFCLNKDDDSVVF EEECCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEE YATDSFDPEVSMSKNHDVLQKKLTSSFEEFINGLVEEDDLE EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKNPCQNCEKNIDLSDIKSVEKTLGYSFPEAFVSHYLSFNGGVPLRAWWACDDGCEPLEI CCCHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEE AAFKPFKYHKMTNDNPNSLIDGCYNEMIRKNVIPSNIIPFGNDWGGNFFCLNKDDDSVVF EEECCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCEEEE YATDSFDPEVSMSKNHDVLQKKLTSSFEEFINGLVEEDDLE EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA